Chuyang

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Chuyang Ye

Ph.D Candidate
Image Analysis and Communications Laboratory
Department of Electrical Engineering
Johns Hopkins University

Former Graduate Student of Electrical and Computer Engineering
Whiting School of Engineering
Johns Hopkins University


Education

Bachelor of Science, 2009, Peking University, Beijing, China

MSE, 2011, Johns Hopkins University, Baltimore, MD, USA

PhD, 2014, Johns Hopkins University, Baltimore, MD, USA

Research interest

DTI tract segmentation in human brain and tractography


Experience

Internship at GE Global Research, June-September 2013

Image Analysis and Communications Lab, Johns Hopkins University, January 2010-present

Communication and Navigation Positioning Laboratory, Peking University, 2008-2009


Publications

  • C. Ye, A. Carass, E. Murano, M. Stone, J.L. Prince, "A Bayesian approach to distinguishing interdigitated muscles in the tongue from limited diffusion weighted imaging", .MICCAI-BAMBI, 2014
  • C. Ye, V. Vaidya, F. Zhao, "Improved mass detection in 3D automated breast ultrasound using region based features and multi-view information", .EMBC, 2014.
  • J.V. Stough, J. Glaister, C. Ye, S.H. Ying, J.L. Prince, and A. Carass, "Automatic method for thalamus parcellation using multi-modal feature classification", .MICCAI 2014
  • N. Shiee, P.-L. Bazin, J.L. Cuzzocreo, C. Ye, B. Kishore, A. Carass, P.A. Calabresi, D.S. Reich, J.L. Prince, D.L. Pham, "Reconstruction of the human cerebral cortex robust to white matter lesions: Method and validation", .Human Brain Mapping 2013.
  • Z. Yang, J.A. Bogovic, C. Ye, A. Carass, S.H. Ying, and J.L. Prince, "Automated cerebellar lobule segmentation using graph cuts", .MICCAI-SATA 2013.
  • C. Ye, J.A. Bogovic, S.H. Ying, and J.L. Prince, "Segmentation of the Complete Superior Cerebellar Peduncles Using a Multi-object Geometric Deformable Model", .ISBI 2013.
  • J.V. Stough, C. Ye, S.H. Ying, and J.L. Prince, "Thalamic Parcellation from Multi-modal Data Using Random Forest Learning", .ISBI 2013.
  • C. Ye, J.A. Bogovic, S.H. Ying, and J.L. Prince, "Parcellation of the Thalamus Using Diffusion Tensor Images and a Multi-object Geometric Deformable Model", .SPIE 2013.
  • C. Ye, P.-L. Bazin, J.A. Bogovic, S.H. Ying, and J.L. Prince, "Labeling of the cerebellar peduncles using a supervised Gaussian classifier with volumetric tract segmentation", .SPIE 2012.
  • C. Ye, P.-L. Bazin,S.H. Ying, and J.L. Prince, "A Fiber Tracking Method Guided by Volumetric Tract Segmentation", .MMBIA 2012.
  • C. Ye, P.-L. Bazin,S.H. Ying, and J.L. Prince, "Fully automatic segmentation of the dentate nucleus using diffusion weighted images", .ISBI 2012.
  • P.-L. Bazin, C. Ye, J.A. Bogovic, N. Shiee, D.S. Reich, J.L. Prince, and D.L. Pham, "Direct segmentation of the major white matter tracts in diffusion tensor images", .NeuroImage 2011.
  • W.R. Gray, J.A. Bogovic, J.T. Vogelstein, C. Ye, B.A. Landman, J.L. Prince, and R.J. Vogelstein, "Magnetic resonance connectome automated pipeline and repeatability analysis", .SfN 2011.


Software

Cerebellar Peduncle Segmentation
FORNI Phantom used in the FORNI paper, Ye et al. 2016, "Estimation of Fiber Orientations Using Neighborhood Information".


Advisor's and research sponsors

Pierre-Louis Bazin
Jerry L. Prince
Sarah Ying
China Scholarship Council