JohnTools

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Favorite tools

Medical Image Analysis/Visualization

  • JIST
    • IACL's medical image processing tools.
  • Paraview
    • An open source visualization tool based on VTK.
  • MIPAV
    • A nice tool from the NIH with lots of tools for image processing. Some good visualization tools too.
  • Camino
    • A nice toolkit for diffusion weighted image processing.
  • FSL
    • Good tools for a wide range of analysis tasks.

Programming

General Analysis

Productivity

  • MS Office
  • Open Office
  • Photoshop
  • GIMP
    • An open-source bitmap graphics package
  • Inkscape
    • An open-source vector graphics package