Difference between revisions of "Lianrui"

From IACL
Jump to: navigation, search
 
(16 intermediate revisions by the same user not shown)
Line 22: Line 22:
  
 
{{h2|Publications}}
 
{{h2|Publications}}
* '''L. Zuo''', B. E. Dewey, A. Carass, Y. He, M. Shao, J.C. Reinhold, & J. L. Prince (2020, October). "[https://link.springer.com/chapter/10.1007/978-3-030-59520-3_3 Synthesizing Realistic Brain MR Images with Noise Control]". In International Workshop on Simulation and Synthesis in Medical Imaging (pp. 21-31). Springer, Cham.
+
* '''Lianrui Zuo''', Blake E. Dewey, Yihao Liu, Yufan He, Scott D. Newsome, Ellen M. Mowry, Susan M. Resnick, Jerry L. Prince, and Aaron Carass. ''[https://doi.org/10.1016/j.neuroimage.2021.118569 '''Unsupervised MR harmonization by learning disentangled representations using information bottleneck theory''']''. NeuroImage, 2021, 118569, ISSN 1053-8119.
* B.E. Dewey, '''L. Zuo''', Carass, A., He, Y., Liu, Y., Mowry, E.M., Newsome, S., Oh, J., Calabresi, P.A. and Prince, J.L., 2020, October. "[https://link.springer.com/chapter/10.1007/978-3-030-59728-3_70 A Disentangled Latent Space for Cross-Site MRI Harmonization]". In International Conference on Medical Image Computing and Computer-Assisted Intervention (pp. 720-729). Springer, Cham.
+
* '''Lianrui Zuo''', Blake E. Dewey, Aaron Carass, Yihao Liu, Yufan He, Peter A. Calabresi, and Jerry L. Prince. ''[https://arxiv.org/abs/2103.13283 '''Information-based Disentangled Representation Learning for Unsupervised MR Harmonization''']''. In International Conference on Information Processing in Medical Imaging, 2021.
* Y. He, A. Carass, '''L. Zuo''', B. E. Dewey, & J. L. Prince (2020). "[https://arxiv.org/abs/2007.03162 Self domain adapted network ]" arXiv preprint arXiv:2007.03162.
+
* Yufan He, Aaron Carass, '''Lianrui Zuo''', Blake E. Dewey, and Jerry L. Prince.  ''[https://www.sciencedirect.com/science/article/pii/S1361841521001821 '''Autoencoder BasedSelf-Supervised Test-Time Adaptation for Medical Image Analysis''']''. Medical Image Analysis, 2021.
* Y. Liu, '''L. Zuo''', A. Carass, Y. He, A. Filippatou, S. D. Solomon, and J. L. Prince. "[https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11313/113130Y/Variational-intensity-cross-channel-encoder-for-unsupervised-vessel-segmentation-on/10.1117/12.2549967.short?SSO=1 Variational intensity cross channel encoder for unsupervised vessel segmentation on OCT angiography]". In Medical Imaging 2020: Image Processing (Vol. 11313, p. 113130Y). International Society for Optics and Photonics.
+
* '''Lianrui Zuo''', Blake E. Dewey, Aaron Carass, Yufan He, Muhan Shao, Jacob C. Reinhold, and Jerry L. Prince. ''[https://link.springer.com/chapter/10.1007/978-3-030-59520-3_3 '''Synthesizing Realistic Brain MR Images with Noise Control''']''. In International Workshop on Simulation and Synthesis in Medical Imaging, 2020.
* '''L. Zuo''', S. Han, A. Carass, S. H. Ying, C. U. Onyike, and J. L. Prince. ''[https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10949/109490J/Automatic-quality-control-using-hierarchical-shape-analysis-for-cerebellum-parcellation/10.1117/12.2512805.full?SSO=1 Automatic Quality Control Using Hierarchical Shape Analysis for Cerebellum Parcellation]''. In Medical Imaging 2019: Image Processing. International Society for Optics and Photonics.
+
* Blake E. Dewey, '''Lianrui Zuo''', Aaron Carass, Yufan He, Yihao Liu, Ellen M. Mowry, Scott Newsome, Jiwon Oh, Peter A. Calabresi, and Jerry L. Prince. ''[https://link.springer.com/chapter/10.1007/978-3-030-59728-3_70 '''A Disentangled Latent Space for Cross-Site MRI Harmonization''']''. In International Conference on Medical Image Computing and Computer-Assisted Intervention, 2020.
* '''L. Zuo''', A. Carass, S. Han, and J. L. Prince. ''[https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10578/105780D/Automatic-outlier-detection-using-hidden-Markov-model-for-cerebellar-lobule/10.1117/12.2295709.full?casa_token=h4PyNPIQpUsAAAAA%3aOpGA32iv_3xXHY1jyeOg9baRTcLSAHVgI60U4u7fFx_NgAaGAfjTT3lhCMgKkWGI9Gf5qKojDg Automatic outlier detection using hidden Markov model for cerebellar lobule segmentation]''. In Medical Imaging 2018: Biomedical Applications in Molecular, Structural, and Functional Imaging (Vol. 10578, p. 105780D). International Society for Optics and Photonics.
+
* Yufan He, Aaron Carass, '''Lianrui Zuo''', Blake E. Dewey, and Jerry L. Prince. ''[https://arxiv.org/abs/2007.03162 '''Self domain adapted network''' ]''. In International  Conference  on  Medical  Image  Computing  and  Computer-Assisted Intervention, 2020.
 +
* Yihao Liu, '''Lianrui Zuo''', Aaron Carass, Yufan He, Angeliki Filippatou, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi and Jerry L. Prince. ''[https://www.spiedigitallibrary.org/conference-proceedings-of-spie/11313/113130Y/Variational-intensity-cross-channel-encoder-for-unsupervised-vessel-segmentation-on/10.1117/12.2549967.short?SSO=1 '''Variational intensity cross channel encoder for unsupervised vessel segmentation on OCT angiography''']''. In International Society for Optics and Photonics: Image Processing, 2020.
 +
* '''Lianrui Zuo''', Shuo Han, Aaron Carass, Sarah H. Ying, Chiadi U. Onyike, and Jerry L. Prince. ''[https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10949/109490J/Automatic-quality-control-using-hierarchical-shape-analysis-for-cerebellum-parcellation/10.1117/12.2512805.full?SSO=1 '''Automatic Quality Control Using Hierarchical Shape Analysis for Cerebellum Parcellation''']''. In International Society for Optics and Photonics: Image Processing, 2019.
 +
* '''Lianrui Zuo''', Aaron Carass, Shuo Han, and Jerry L. Prince. ''[https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10578/105780D/Automatic-outlier-detection-using-hidden-Markov-model-for-cerebellar-lobule/10.1117/12.2295709.full?casa_token=h4PyNPIQpUsAAAAA%3aOpGA32iv_3xXHY1jyeOg9baRTcLSAHVgI60U4u7fFx_NgAaGAfjTT3lhCMgKkWGI9Gf5qKojDg '''Automatic outlier detection using hidden Markov model for cerebellar lobule segmentation''']''. In International Society for Optics and Photonics: Image Processing, 2018.
  
 
{{h2|Thesis}}
 
{{h2|Thesis}}
* '''L. Zuo'''. ''[https://jscholarship.library.jhu.edu/handle/1774.2/59275 Quality Assurance Using Outlier Detections For Cerebellar Lobule Segmentation]''. Diss. Johns Hopkins University, 2018.
+
* '''Lianrui Zuo'''. ''[https://jscholarship.library.jhu.edu/handle/1774.2/59275 '''Quality Assurance Using Outlier Detections For Cerebellar Lobule Segmentation''']''. Diss. Johns Hopkins University, 2018.
  
 
{{h2|Awards}}
 
{{h2|Awards}}
 +
* Best Poster Award. The 27th International Conference on Information Processing in Medical Imaging (IPMI 2021).
 
* Scientific Director Award. The 25th Annual National Institute on Aging Intramural Research Program Scientific Retreat, 2020.
 
* Scientific Director Award. The 25th Annual National Institute on Aging Intramural Research Program Scientific Retreat, 2020.
* Pre-doctoral Intramural Research Training Award, National Institute of Health, 2019 – 2020.
+
* Pre-doctoral Intramural Research Training Award, National Institute of Health, 2019 – 2021.
  
 
{{h2|Teaching}}
 
{{h2|Teaching}}
* Teaching Assistant, EN 520.414/520.614 Image Processing and Analysis I, The Johns Hopkins University. ''Sep 2018 – Dec 2018''. (Named as finalist for [https://engineering.jhu.edu/ece/2019/03/08/najim-dehak-shuwen-wei-and-lianrui-zuo-named-as-finalists-for-whiting-school-of-engineerings-excellence-in-teaching-awards/#.XJBWXBNKiMI Whiting School of Engineering’s Excellence in Teaching Awards])
+
* Teaching Assistant, EN 520.414/520.614 Image Processing and Analysis I, The Johns Hopkins University. ''Fall 2017, Fall 2018'' (Named as finalist for [https://engineering.jhu.edu/ece/2019/03/08/najim-dehak-shuwen-wei-and-lianrui-zuo-named-as-finalists-for-whiting-school-of-engineerings-excellence-in-teaching-awards/#.XJBWXBNKiMI Whiting School of Engineering’s Excellence in Teaching Awards]).
* Teaching Assistant, EN 520.433/520.623 Medical Image Analysis, The Johns Hopkins University. ''Jan 2018 – Apr 2018''
+
* Teaching Assistant, EN 520.433/520.623 Medical Image Analysis, The Johns Hopkins University. ''Spring 2018, Spring 2021''
* Teaching Assistant, EN 520.414/520.614 Image Processing and Analysis I, The Johns Hopkins University. ''Sep 2017 – Dec 2017''
+

Latest revision as of 09:46, 8 September 2021

Me giving a talk at SPIE Medical Imaging 2018 at Houston, USA
Me giving a talk at SPIE Medical Imaging 2019 at San Diego, USA
Lianrui Zuo
Image Analysis and Communications Lab, The Johns Hopkins University
Laboratory of Behavioral Neuroscience, National Institute on Aging, National Institutes of Health
Email: lr_zuo@jhu.edu

Biography

I am currently a third year PhD student in the Department of Electrical and Computer Engineering at the Johns Hopkins University. Staring from January 2017, I work in the Image Analysis and Communications Lab (IACL) as a research assistant advised by Dr. Jerry Prince. Starting from September 2019, I am co-affiliated with the National Institute on Aging at National Institutes of Health working as a pre-doctoral research fellow.

Research Interests

  • Multi-contrast MRI synthesis and harmonization.
  • Image quality assessment.
  • Machine learning and deep learning

Education

Publications

Thesis

Awards

  • Best Poster Award. The 27th International Conference on Information Processing in Medical Imaging (IPMI 2021).
  • Scientific Director Award. The 25th Annual National Institute on Aging Intramural Research Program Scientific Retreat, 2020.
  • Pre-doctoral Intramural Research Training Award, National Institute of Health, 2019 – 2021.

Teaching

  • Teaching Assistant, EN 520.414/520.614 Image Processing and Analysis I, The Johns Hopkins University. Fall 2017, Fall 2018 (Named as finalist for Whiting School of Engineering’s Excellence in Teaching Awards).
  • Teaching Assistant, EN 520.433/520.623 Medical Image Analysis, The Johns Hopkins University. Spring 2018, Spring 2021