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15 Most Recent IACL papers from PubMed

Yeyi Yun, Aaron Carass, Andrew Lang, Jerry L Prince, Bhavna J Antony
Collaborative SDOCT Segmentation and Analysis Software.
Proc SPIE Int Soc Opt Eng: 2017, 10138;
[PubMed:28919660] [DOI]

Bhavna Josephine Antony, Byung-Jin Kim, Andrew Lang, Aaron Carass, Jerry L Prince, Donald J Zack
Automated segmentation of mouse OCT volumes (ASiMOV): Validation & clinical study of a light damage model.
PLoS ONE: 2017, 12(8);e0181059
[PubMed:28817571] [DOI]

Jordan Ramsey, Jerry L Prince, Arnold D Gomez
Test Suite for Image-Based Motion Estimation of the Brain and Tongue.
Proc SPIE Int Soc Opt Eng: 2017, 10137;
[PubMed:28781414] [DOI]

Andrew Lang, Aaron Carass, Ava K Bittner, Howard S Ying, Jerry L Prince
Improving graph-based OCT segmentation for severe pathology in Retinitis Pigmentosa patients.
Proc SPIE Int Soc Opt Eng: 2017, 10137;
[PubMed:28781413] [DOI]

Murat Bilgel, Rebecca L Koscik, Yang An, Jerry L Prince, Susan M Resnick, Sterling C Johnson, Bruno M Jedynak
Temporal Order of Alzheimer's Disease-Related Cognitive Marker Changes in BLSA and WRAP Longitudinal Studies.
J. Alzheimers Dis.: 2017, 59(4);1335-1347
[PubMed:28731452] [DOI]

Fangxu Xing, Jonghye Woo, Arnold D Gomez, Dzung L Pham, Philip V Bayly, Maureen Stone, Jerry L Prince
Phase Vector Incompressible Registration Algorithm (PVIRA) for Motion Estimation from Tagged Magnetic Resonance Images.
IEEE Trans Med Imaging: 2017;
[PubMed:28692967] [DOI]

Jeffrey Glaister, Aaron Carass, Tziona NessAiver, Joshua V Stough, Shiv Saidha, Peter A Calabresi, Jerry L Prince
Thalamus segmentation using multi-modal feature classification: Validation and pilot study of an age-matched cohort.
Neuroimage: 2017, 158;430-440
[PubMed:28669906] [DOI]

Junghoon Lee, Omar Y Mian, Yi Le, Hee Joon Bae, E Clif Burdette, Theodore L DeWeese, Jerry L Prince, Daniel Y Song
Intraoperative Registered Ultrasound and Fluoroscopy (iRUF) for dose calculation during prostate brachytherapy: Improved accuracy compared to standard ultrasound-based dosimetry.
Radiother Oncol: 2017, 124(1);61-67
[PubMed:28647400] [DOI]

Aaron Carass, Snehashis Roy, Amod Jog, Jennifer L Cuzzocreo, Elizabeth Magrath, Adrian Gherman, Julia Button, James Nguyen, Pierre-Louis Bazin, Peter A Calabresi, Ciprian M Crainiceanu, Lotta M Ellingsen, Daniel S Reich, Jerry L Prince, Dzung L Pham
Longitudinal multiple sclerosis lesion segmentation data resource.
Data Brief: 2017, 12;346-350
[PubMed:28491937] [DOI]

Shailesh Ganpule, Nitin P Daphalapurkar, Kaliat T Ramesh, Andrew K Knutsen, Dzung L Pham, Philip V Bayly, Jerry L Prince
A Three-Dimensional Computational Human Head Model That Captures Live Human Brain Dynamics.
J. Neurotrauma: 2017, 34(13);2154-2166
[PubMed:28394205] [DOI]

Licia Pereira, Raag D Airan, Ann Fishman, Jay J Pillai, Kalyani Kansal, Chiadi U Onyike, Jerry L Prince, Sarah H Ying, Haris I Sair
Resting-state functional connectivity and cognitive dysfunction correlations in spinocerebelellar ataxia type 6 (SCA6).
Hum Brain Mapp: 2017, 38(6);3001-3010
[PubMed:28295805] [DOI]

Ke Li, Chuyang Ye, Zhen Yang, Aaron Carass, Sarah H Ying, Jerry L Prince
Quality Assurance using Outlier Detection on an Automatic Segmentation Method for the Cerebellar Peduncles.
Proc SPIE Int Soc Opt Eng: 2016, 9784;
[PubMed:28203039] [DOI]

Aaron Carass, Snehashis Roy, Amod Jog, Jennifer L Cuzzocreo, Elizabeth Magrath, Adrian Gherman, Julia Button, James Nguyen, Ferran Prados, Carole H Sudre, Manuel Jorge Cardoso, Niamh Cawley, Olga Ciccarelli, Claudia A M Wheeler-Kingshott, Sébastien Ourselin, Laurence Catanese, Hrishikesh Deshpande, Pierre Maurel, Olivier Commowick, Christian Barillot, Xavier Tomas-Fernandez, Simon K Warfield, Suthirth Vaidya, Abhijith Chunduru, Ramanathan Muthuganapathy, Ganapathy Krishnamurthi, Andrew Jesson, Tal Arbel, Oskar Maier, Heinz Handels, Leonardo O Iheme, Devrim Unay, Saurabh Jain, Diana M Sima, Dirk Smeets, Mohsen Ghafoorian, Bram Platel, Ariel Birenbaum, Hayit Greenspan, Pierre-Louis Bazin, Peter A Calabresi, Ciprian M Crainiceanu, Lotta M Ellingsen, Daniel S Reich, Jerry L Prince, Dzung L Pham
Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.
Neuroimage: 2017, 148;77-102
[PubMed:28087490] [DOI]

Kalyani Kansal, Zhen Yang, Ann M Fishman, Haris I Sair, Sarah H Ying, Bruno M Jedynak, Jerry L Prince, Chiadi U Onyike
Structural cerebellar correlates of cognitive and motor dysfunctions in cerebellar degeneration.
Brain: 2017, 140(3);707-720
[PubMed:28043955] [DOI]

Min Chen, Aaron Carass, Amod Jog, Junghoon Lee, Snehashis Roy, Jerry L Prince
Cross contrast multi-channel image registration using image synthesis for MR brain images.
Med Image Anal: 2017, 36;2-14
[PubMed:27816859] [DOI]


Also see our complete Publications list



Recent News Items

2017

September

Yufan He with his awarding winning poster at the OMIA Workshop, held in conjunction with MICCAI 2017.
  • Jeffrey Glaister presented "Falx Cerebri Segmentation via Multiatlas Boundary Fusion" at the 20th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017.  (doi)
  • Presenting during Workshops at the 20th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017.
    • Lotta M. Ellingsen presented "Automated Parcellation of the Ventricular System: Validation Study on Normal Pressure Hydrocephalus".  (doi)
    • Can Zhao presented "Whole brain segmentation and labeling from CT using synthetic MR images"  (doi) and "A super-voxel based random forest synthesis framework for bidirectional MR/CT synthesis".
    • Yufan He presented "Towards topological correct segmentation of macular OCT from cascaded FCNs" and won the Best Poster Prize as part of the OMIA Workshop.  (doi)
    • Dr. Jerry L. Prince presented "Group Patterns of Acceleration-Induced Brain Deformation in Vivo".
  • Dr. Jerry L. Prince presnted a keynote at Brain Lesion Workshop entitled "Dice overlap measures for multiple objects: Application to lesion segmentation".


July

  • The paper "Automated segmentation of mouse OCT volumes (ASiMOV): Validation & clinical study of a light damage model" appears in PLoS ONE  (doi)  (PubMed)
  • Jeffrey Glaister's paper "Thalamus segmentation using multi-modal feature classification: Validation and pilot study of an age-matched cohort" appears in NeuroImage.  (doi)  (PubMed)


May

  • Dr. Lang and Dr. Bilgel receive their PhDs from Electrical & Computer Engineering and Biomedical Engineering, respectively. Lab alumni Yeyi Yun graduates with a BA, triple majoring in Electrical & Computer Engineering, Economics, and Mathematics.
Dr. Prince collecting his award for promoting diversity.


April


March

  • The 2017 ENIGMA Cerebellum Challenge and Workshop website launches. The Challenge and Workshop is a collaboration between IACL, the MASI Lab at Vanderbilt, and the IGC Lab at the Univ. of Southern California. The one day Challenge and Workshop is a satellite event of MICCAI 2017, which will be held in Quebec, Canada.


February

Dr. Prince after meeting with students from the "Discovery to Market" class from The Johns Hopkins Carey Business School.
Dr. Prince presenting the poster "Improving graph-based OCT segmentation for severe pathology in Retinitis Pigmentosa patients" at SPIE-MI 2017.
  • IACL members present papers at the SPIE Medical Imaging (SPIE-MI 2017) meeting in Orlando, FL, February 11 - 16 2017.
    • Dr. Jerry L. Prince presents "Test-suite for image-based motion estimation of the brain and tongue", "Longitudinal Analysis of Mouse OCT Volumes", "Improving graph-based OCT segmentation for severe pathology in Retinitis Pigmentosa patients", and "Collaborative SDOCT Segmentation and Analysis Software".
    • Blake E. Dewey presents "Efficient Multi-Atlas Registration using an Intermediate Template Image".
    • Jeffrey Glaister presents "Automatic falx cerebri and tentorium cerebelli segmentation from Magnetic Resonance Images".
    • Junghoon Lee presents "Multi-atlas-based CT synthesis from conventional MRI with patch-based refinement for MRI-based radiotherapy planning".
  • Other accepted papers at SPIE-MI 2017 coming from collaborations with IACL.
    • With colleagues at MGH "A four-dimensional motion field atlas of the tongue from tagged and cine magnetic resonance imaging".


IACL at SPIE 2017
80012971-ed1s.jpg   80012976-ed1s.jpg   80012980-ed1s.jpg


January

  • The papers "Random forest regression for magnetic resonance image synthesis",  (doi) (PubMed),"Longitudinal Multiple Sclerosis Lesion Segmentation: Resource and Challenge",  (doi) (PubMed), and "Cross contrast multi-channel image registration using image synthesis for MR brain images",  (doi) (PubMed) are published.



2016

December

  • The paper "MIND Demons: Symmetric Diffeomorphic Deformable Registration of MR and CT for Image-Guided Spine Surgery", IEEE Trans. on Medical Imaging, 35(11):2413-2424, 2016 (doi) (PubMed) is published.


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