Difference between revisions of "Research"
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| − | <meta name="title" content="IACL Research"/> | + | <!-- <meta name="title" content="IACL Research"/> --> |
{{h2|Research}} | {{h2|Research}} | ||
{{TOCright}} | {{TOCright}} | ||
{{h3|Active Projects}} | {{h3|Active Projects}} | ||
| + | {{h4|Brain Mapping}} | ||
| + | * [[Protocol for Cerebellar Labeling]] | ||
| + | * [[Automatic method for thalamus parcellation using multi-modal feature classification]] | ||
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| + | <!-- | ||
| + | {{h4|Biological Motion Estimation}} | ||
| + | * Tongue | ||
| + | * Brain Biomechanics | ||
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| + | <!-- | ||
| + | {{h4|Image Processing and Analysis}} | ||
| + | * Synethesis | ||
| + | * Quality Control | ||
| + | --> | ||
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| + | {{h4|Optical Coherence Tomography}} | ||
| + | * [[Automatic segmentation of microcystic macular edema in OCT]] | ||
| + | <!-- | ||
| + | * Deep learning based OCT | ||
| + | * Fast Levelsets | ||
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| + | {{h3|Previous Projects}} | ||
{{h4|Brain Mapping}} | {{h4|Brain Mapping}} | ||
* [[CRUISE|CRUISE: Cortical Reconstruction Using Implicit Surface Evolution]] | * [[CRUISE|CRUISE: Cortical Reconstruction Using Implicit Surface Evolution]] | ||
* [[Longitudinal changes in cortical thickness associated with normal aging]] | * [[Longitudinal changes in cortical thickness associated with normal aging]] | ||
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* [[Principal Component Analysis of Cerebellar Shape]] | * [[Principal Component Analysis of Cerebellar Shape]] | ||
* [[Automatic magnetic resonance spinal cord segmentation]] | * [[Automatic magnetic resonance spinal cord segmentation]] | ||
* [[Deformation field correction for spatial normalization of PET images using a population-derived partial least squares model]] | * [[Deformation field correction for spatial normalization of PET images using a population-derived partial least squares model]] | ||
* [[PET Attenuation Correction using Synthetic CT from Ultrashort Echo-time MRI]] | * [[PET Attenuation Correction using Synthetic CT from Ultrashort Echo-time MRI]] | ||
| − | * [[ | + | * [[System for integrated neuroimaging analysis and processing of structure]] |
* [[Deep Learning for Cerebellar Ataxia Classification and Functional Score Regression]] | * [[Deep Learning for Cerebellar Ataxia Classification and Functional Score Regression]] | ||
* [[Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis]] | * [[Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis]] | ||
| + | * {{static|pdf/|Statistical Characterization of Brain Tissue in MRI}} | ||
| + | * {{static|ice/|Interactive Cortical Editor}} | ||
| + | * {{static|ipmi/|Finding the Brain Cortex Using Fuzzy Segmentation, Isosurfaces, and Deformable Surface Models}} | ||
| + | * {{static|gtca/|Multi-scale Graph-based Topology Correction Algorithm}} | ||
| + | * {{static|tgdm/|Topology Preserving Geometric Deformable Models}} | ||
| + | * {{static|asm/|Active Shape Models for Sulcal Labeling}} | ||
| + | * {{static|fantasm/|Robust Tissue Classification using FANTASM}} | ||
| + | * {{static|ati/|Automatically Identifying White Matter Tracts Using Cortical Labels}} | ||
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* {{static|mrmarkers/|Cardiac Material Markers from Tagged MRI}} | * {{static|mrmarkers/|Cardiac Material Markers from Tagged MRI}} | ||
* {{static|harp/|Harmonic Phase (HARP) Magnetic Resonance Imaging}} | * {{static|harp/|Harmonic Phase (HARP) Magnetic Resonance Imaging}} | ||
| + | :* [[Resources#HARP|Download available from our Resources Page]] | ||
* {{static|fastharp/|Real-Time Imaging of Cardiac Strain Using a FastHARP Pulse Sequence}} | * {{static|fastharp/|Real-Time Imaging of Cardiac Strain Using a FastHARP Pulse Sequence}} | ||
* [[Three-dimensional regional strain analysis in myocardial infarction]] | * [[Three-dimensional regional strain analysis in myocardial infarction]] | ||
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* {{static|filtint/|Recursive Spatio-Temporal Function Estimation}} | * {{static|filtint/|Recursive Spatio-Temporal Function Estimation}} | ||
* [[MGDM|Multiple-object Geometric Deformable Model]] | * [[MGDM|Multiple-object Geometric Deformable Model]] | ||
| + | :* [http://www.nitrc.org/projects/mgdm/ (Software Page)] | ||
* [[Reconstruction of high resolution tongue volumes from MRI]] | * [[Reconstruction of high resolution tongue volumes from MRI]] | ||
* [[Magnetic Resonance Image Example Based Contrast Synthesis]] | * [[Magnetic Resonance Image Example Based Contrast Synthesis]] | ||
| + | :* [http://www.nitrc.org/projects/image_synthesis/ (Software Page)] | ||
* [[MR Image Synthesis by Contrast Learning On Neighborhood Ensembles]] | * [[MR Image Synthesis by Contrast Learning On Neighborhood Ensembles]] | ||
* [[Subject Specific Sparse Dictionary Learning for Atlas Based Brain MRI Segmentation]] | * [[Subject Specific Sparse Dictionary Learning for Atlas Based Brain MRI Segmentation]] | ||
| − | * | + | :* {{iacl|~roy/softwares/S3DL_withlesion.zip|(Software Download)}} |
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* [[Seed Segmentation in Prostate Brachytherapy]] | * [[Seed Segmentation in Prostate Brachytherapy]] | ||
* [[Ultrasound-Fluoroscopy Registration in Prostate Brachytherapy]] | * [[Ultrasound-Fluoroscopy Registration in Prostate Brachytherapy]] | ||
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{{h4|Optical Coherence Tomography}} | {{h4|Optical Coherence Tomography}} | ||
* [[Retinal layer segmentation of macular OCT images]] | * [[Retinal layer segmentation of macular OCT images]] | ||
| + | :* [http://www.nitrc.org/projects/aura_tools/ (Software Page)] | ||
* [[MGDM segmentation of macular OCT images]] | * [[MGDM segmentation of macular OCT images]] | ||
* [[Analysis of macular OCT images using deformable registration]] | * [[Analysis of macular OCT images using deformable registration]] | ||
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Latest revision as of 00:37, 3 July 2022
Research
Active Projects
Brain Mapping
- Protocol for Cerebellar Labeling
- Automatic method for thalamus parcellation using multi-modal feature classification
Optical Coherence Tomography
Previous Projects
Brain Mapping
- CRUISE: Cortical Reconstruction Using Implicit Surface Evolution
- Longitudinal changes in cortical thickness associated with normal aging
- Principal Component Analysis of Cerebellar Shape
- Automatic magnetic resonance spinal cord segmentation
- Deformation field correction for spatial normalization of PET images using a population-derived partial least squares model
- PET Attenuation Correction using Synthetic CT from Ultrashort Echo-time MRI
- System for integrated neuroimaging analysis and processing of structure
- Deep Learning for Cerebellar Ataxia Classification and Functional Score Regression
- Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis
- Statistical Characterization of Brain Tissue in MRI
- Interactive Cortical Editor
- Finding the Brain Cortex Using Fuzzy Segmentation, Isosurfaces, and Deformable Surface Models
- Multi-scale Graph-based Topology Correction Algorithm
- Topology Preserving Geometric Deformable Models
- Active Shape Models for Sulcal Labeling
- Robust Tissue Classification using FANTASM
- Automatically Identifying White Matter Tracts Using Cortical Labels
Biological Motion Estimation
- Real-Time Imaging of Cardiac Strain Using a FastHARP Pulse Sequence
- Three-dimensional regional strain analysis in myocardial infarction
- Determining Functional Units of Tongue Motion via Graph-regularized Sparse Non-negative Matrix Factorization
- A Bayesian Approach to Distinguishing Interdigitated Muscles in the Tongue from Limited Diffusion Weighted Imaging
Image Processing and Analysis
- GVF Active Contours
- Recursive Spatio-Temporal Function Estimation
- Multiple-object Geometric Deformable Model
- Reconstruction of high resolution tongue volumes from MRI
- Magnetic Resonance Image Example Based Contrast Synthesis
- MR Image Synthesis by Contrast Learning On Neighborhood Ensembles
- Subject Specific Sparse Dictionary Learning for Atlas Based Brain MRI Segmentation
Image-Guided Interventions
- Prostate Brachytherapy Intraoperative Seed Reconstruction
- Seed Segmentation in Prostate Brachytherapy
- Ultrasound-Fluoroscopy Registration in Prostate Brachytherapy
