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Brain Mapping Publications
Brain Mapping


  1. J. Wan, A. Carass, S.M. Resnick, and J.L. Prince, "Characterizing Regional Gray Matter Thickness Trends in Normal Aging", 14th Annual Meeting of the Organization for Human Brain Mapping (HBM 2008), Melbourne, Australia, June 15-19, 2008.
  2. J. Bogovic, A. Carass, J. Wan, B. Landman, and J.L. Prince, "DTI Fiber Tractography Reveals Precentral-Postcentral Gyral Connectivity", 14th Annual Meeting of the Organization for Human Brain Mapping (HBM 2008), Melbourne, Australia, June 15-19, 2008.
  3. J. Wan, A. Carass, S.M. Resnick, and J.L. Prince, "Automated Reliable Labeling of the Cortical Surface", Fifth IEEE International Symposium on Biomedical Imaging (ISBI 2008), Paris, France, May 14-17, 2008.
  4. J. Bogovic, A. Carass, J. Wan, B. Landman, and J.L. Prince, "Automated White Matter Tract Parcellation from DTI Fiber Tractography", Fifth IEEE International Symposium on Biomedical Imaging (ISBI 2008), Paris, France, May 14-17, 2008.
  5. S. Roy, H. Agarwal, A. Carass, Y. Bai, D.L. Pham, and J.L. Prince, "Fuzzy C-Means with Variable Compactness", Fifth IEEE International Symposium on Biomedical Imaging (ISBI 2008), Paris, France, May 14-17, 2008.
  6. A. Carass, M.B. Wheeler, J. Cuzzocre, P.-L. Bazin, S.S. Bassett, and J.L. Prince, "A Joint Registration and Segmentation Approach to Skull Stripping", Fourth IEEE International Symposium on Biomedical Imaging (ISBI 2007), Arlington, VA, April 12-15, 2007.
  7. Hao Huang, Aaron Carass, Jerry L. Prince, Bennett Landman, Peter C. M. van Zijl, and Susumu Mori, "Cortico-cortical Connectivity Revealed by DTI-based Tractography," ISMRM, Seattle, May 2006.
  8. Prasanna Anbazhagan, Aaron Carass, P. L. Bazin, and Jerry L. Prince, "Automatic Estimation of Mid Sagittal Plane and AC-PC alignment based on Nonrigid Registration," Third IEEE International Symposium on Biomedical Imaging (ISBI 2006), Arlington, VA, April 6-9, 2006.
  9. Y. Bai and J. L. Prince, "Octree-based Topology-preserving Isosurface Simplification," MMBIA, 2006.
  10. Y. Bai, X. Han, D. Pham, and J. L. Prince, "Super-resolved multi-channel fuzzy segmentation of MR brain images," SPIE Medical Imaging, San Diego, 16 February, 2005.
  11. D. Tosun, M.E. Rettmann, D. Q. Naiman, S. M. Resnick, M. A. Kraut, and J. L. Prince, "Cortical Reconstruction Using Implicit Surface Evolution: A Landmark Validation Study," Proceedings of Medical Image Computing and Computer Assisted Interventions (MICCAI), St. Malo, France, October, 2004.
  12. X. Han, D.L. Pham, D. Tosun, M.E. Rettmann, C. Xu, and J. L. Prince, "CRUISE: Cortical Reconstruction Using Implicit Surface Evolution, NeuroImage, vol. 23, pp. 997--1012, 2004.
  13. D. Pham and J. L. Prince, "Robust Unsupervised Tissue Classification in MR Images," Proc. 2nd Int. Symp. Biomedical Imaging (ISBI 2004), Arlington, VA, April 15-18, 2004.
  14. X. Tao, J.L. Prince, and C. Davatzikos, "An Automated Method for Finding Curves of Sulcal Fundi on the Human Cortical Surface," Proc. 2nd Int. Symp. Biomedical Imaging (ISBI 2004), Arlington, VA, April 15-18, 2004.
  15. Y. Bai, X. Han, and J. L. Prince, "Super-resolution Reconstruction of MR Brain Images," Proc. of Princeton Conf. on Information Sciences and Systems, March 17-19, 2004.
  16. D. Tosun, M. E. Rettmann, X. Han, X. Tao, C. Xu, S. M. Resnick, D. Pham, and J. L. Prince, "Cortical Surface Segmentation and Mapping," NeuroImage, vol. 23, pp. S108--S118, 2004.
  17. D. Tosun, M. E. Rettmann, and J. L. Prince, "Mapping Techniques for Aligning Sulci Across Multiple Brains," Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Montreal, Canada, November 14-18, 2003.
  18. D. Tosun and J. L. Prince, "Mapping Techniques for Aligning Sulci Across Multiple Brains," Medical Imaging Analysis, vol. 8, pp. 295--309, 2004.
  19. X. Han, C. Xu, and J. L. Prince, "A topology preserving level set method for geometric deformable models, IEEE Trans. Pattern Analysis Machine Intelligence, vol. 25, no. 6, pp. 755--768, June 2003.
  20. X. Han, C. Xu, and J. L. Prince, "Topology-Preserving Geometric Deformable Models and Brain Reconstruction", Geometric Level Set Methods in Imaging, Vision, and Graphics, Edited by Stanley Osher and Nikos Paragios, Springer-Verlag, 2003.
  21. K. Behnke, M. Rettmann, D. Pham, D. Shen, S. Resnick, C. Davatzikos, and J. L. Prince, "Automatic classification of sulcal regions of the human brain cortex using pattern recognition," in Proc. SPIE's Medical Imaging, San Diego, CA, Feb. 15-20, 2003. [p153]
  22. M.E. Rettmann, X. Tao, J. L. Prince, "Assisted labeling techniques for the human brain cortex," Proc. SPIE Medical Imaging 2002, vol. 4684, pp. 179-190, San Diego, CA, Feb. 23-28, 2002. [p148]
  23. D.L. Pham, X. Han, M.E. Rettmann, C. Xu, D. Tosun, S.M. Resnick, J. L. Prince, "New approaches for measuring changes in the cortical surface using an automatic reconstruction algorithm," Proc. SPIE Medical Imaging 2002, vol. 4684, pp. 191-200, San Diego, CA, Feb. 23-28, 2002. [p147]
  24. X. Han, C. Xu, and J. L. Prince, "A Topology Preserving Deformable Model Using Level Sets," IEEE Computer Society Conference on Computer Vision and Pattern Recognition, vol.2, pp.765-770, Kauai Hawai, 8-14 December 2001. [p131]
  25. X. Han, C. Xu, D. Tosun and J.L. Prince, "Cortical Surface Reconstruction Using a Topology Preserving Geometric Deformable Model," 5th IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA 2001), Kauai, Hawaii, December 2001.
  26. M.E. Rettmann, X. Han and J.L. Prince, "Automated Parcellation of the Cortical Surface for Computation of Regional Gyrification Indices," 7th International Conference on Functional Mapping of the Human Brain (HBM) , June 2001.
  27. D. Tosun, M.E. Rettmann, X. Tao, X. Han, C. Xu, J.L. Prince, "Calculation of Human Cerebral Cortical Thickness on Opposing Sulcal Banks," 7th International Conference on Functional Mapping of the Human Brain (HBM) , June 2001.
  28. X. Tao, X. Han, M.E. Rettmann, J.L. Prince and C. Davatzikos, "Statistical Study on Cortical Sulci of Human Brains"Proceedings of the XVIIth International Conference on Information Processing in Medical Imaging (IPMI) , June 2001.
  29. X. Han, C. Xu, M.E. Rettmann and J.L. Prince, " Automatic Segmentation Editing for Cortical Surface Reconstruction" Proceedings of SPIE Medical Imaging , Feb 2001.
  30. D. Tosun and J.L. Prince, " A Hemispherical Map for the Human Brain Cortex" Proceedings of SPIE Medical Imaging , Feb 2001.
  31. M.E. Rettmann, X. Han, and J.L. Prince, "Watersheds on the Cortical Surface for Automated Sulcal Segmentation," IEEE Workshop on Mathematical Methods in Biomedical Image Analysis , pages 20-27, June 2000.
  32. M.E. Rettmann, X. Han, D.L. Pham and J.L. Prince, "Geodesics for Sulcal Segmentation and Depth Measurements," 6th International Conference on Functional Mapping of the Human Brain (HBM) , S667, June 2000 .
  33. D. Yu, C. Xu, J.L. Prince, "A New Surface Editing Tool for Generating Truth Models of the Human Cortical Surface", 6th International Conference on Function Mapping of the Human Brain, June 2000.
  34. C. Xu, X. Han, J.L. Prince, "Improving Cortical Surface Reconstruction Accuracy Using an Anatomically Consistent Gray Matter Representation," NeuroImage Human Brain Mapping 2000 Meeting, Poster N. 581, NeuroImage Vol. 11, No. 5, May 2000.
  35. X. Han, M.E. Rettmann, C. Xu, and J.L. Prince, "Morphology on Triangle Meshes Using Geodesic Distance", Conf. on Info. Sci.. Sys., Princeton University, March 15-17, 2000.
  36. D. Yu, C. Xu, M.E. Rettmann, D.L. Pham and J.L. Prince, "Quantitative Validation of a Deformable Cortical Surface Model," SPIE International Symposium on Medical Imaging , February 2000 .
  37. D. Yu,. "Quantitative Validation of a Cortical Surface Reconstruction Method", MSE thesis, The Johns Hopkins University, January 2000.
  38. M.E. Rettmann, C. Xu, D.L. Pham & J.L. Prince, "Automated Segmentation of Sulcal Regions," 2nd International Conference on Medical Image Computing and Computer-Assisted Interventions (MICCAI), pgs 158-167, Springer-Verlag, September 1999 .
  39. C. Xu, D. L. Pham, M. E. Rettmann, D. N. Yu, and J. L. Prince, "Reconstruction of the Human Cerebral Cortex from Magnetic Resonance Images," IEEE Transactions on Medical Imaging, 18(6), pp. 467-480, June 1999. [.pdf (0.9MB)]. Note: this is an application of using GGVF deformable surface for 3D brain segmentation.
  40. C. Xu, D. Pham, M.E. Rettmann, D. Yu, and J.L. Prince, "Reconstruction of the Human Cerebral Cortex from Magnetic Resonance Images", IEEE Transactions in Medical Imaging, 18(6), June 1999.
  41. M.E. Etemad, C. Xu, D.L. Pham, D. Yu, and J.L. Prince, "On Automated Segmentation of Buried Gyri," 5th International Conference on Functional Mapping of the Human Brain (HBM), S143, June 1999
  42. C. Xu, D. L. Pham, M. E. Rettmann, D. N. Yu, and J. L. Prince, "Reconstruction of the Central Layer of the Human Cerebral Cortex from MR images," Proc. of the First International Conference on Medical Image Computing and Computer Assisted Interventions (MICCAI'98), pp. 482-488, October 1998. [.ps (7MB), .ps.gz (1.4MB)].
  43. C. Xu, M.E. Etemad, D. Yu, D.L. Pham, and J.L. Prince, "A Spherical Map for Cortical Geometry," 4th International Conference on Functional Mapping of the Human Brain, June 1998
  44. A.F. Goldszal, C. Davatzikos, D.L. Pham, M.X.H. Yan, R.N. Bryan and S.M. Resnick, "An Image Processing System for Qualitative and Quantitative Volumetric Analysis of Brain Images," Journal of Computer Assisted Tomography, 22(5):827-837, 1998.
  45. D.L. Pham, J.L. Prince, A.P. Dagher, and C. Xu, "An Automated Technique for Statistical Characterization of Brain Tissues in Magnetic Resonance Imaging," International Journal of Pattern Recognition and Artificial Intelligence, 11(8):1189--1211,1997.
  46. C. Xu, D.L. Pham, and J.L. Prince, "Finding the Brain Cortex Using Fuzzy Segmentation, Isosurfaces, and Deformable Surface Models", Proceedings of the XVth International Conference on Information Processing in Medical Imaging (IPMI'97), 399-404, June 1997.
  47. D.L. Pham, J.L. Prince, and A.P. Dagher, "Estimation of Joint Probability Density Functions in Magnetic Resonance Imaging," Proceedings of The Ninth Workshop on Image and Multidimensional Signal Processing (IMDSP), pp. 148-149, 1996.
  48. C. A. Davatzikos, M. Vaillant, S. Resnick, J. L. Prince, S. Letovsky, and R. N. Bryan, "Morphological analysis of brain structures using spatial normalization", Proc. Visualization in Biomedical Computing, Hamburg, Germany, September 22-25, 1996.
  49. C.A. Davatzikos, M. Vaillant, S. Resnick, J.L. Prince, S. Letovsky, and R.N. Bryan, "A Computerized Approach for Morphological Analysis of the Corpus Callosum," Journal of Computer Assisted Tomography, 20(1):88-97, Jan. 1996.
  50. D.L. Pham, J.L. Prince, A.P. Dagher, and C. Xu, "An Automated Technique for Statistical Characterization of Brain Tissues in Magnetic Resonance Imaging," International Journal of Pattern Recognition and Artificial Intelligence, August 1996
  51. C.A. Davatzikos, M. Vaillant, S. Resnick, J.L. Prince, S. Letovsky, and R.N. Bryan, "A Computerized Approach for Morphological Analysis of the Corpus Callosum," Journal of Computer Assisted Tomography, 20(1):88-97, Jan. 1996.
  52. C.A. Davatzikos and J.L. Prince, "An Active Contour Model for Mapping the Cortex", IEEE Transactions on Medical Imaging, 14(1):65-80, March 1995.
  53. C.A. Davatzikos and J.L. Prince, "Brain Image Registration Based on Curve Mapping", Proceedings of the IEEE Workshop on Biomedical Image Analysis, June 24-25, 1994, Seattle, Washington. IEEE Computer Society Press, Los Alamitos, CA, pp. 245-254, 1994.
  54. C.A. Davatzikos, J.L. Prince, and R.N. Bryan, "Brain Image Registration Based on Cortical Contour Mapping", Proceedings of the IEEE 1993 Nuclear Science Symposium and Medical Imaging Conference, pp. 1823-1826, San Francisco, November 4-6, 1993.
  55. H.W. Muller-Gartner, J.M. Links, J.L. Prince, R.N. Bryan, E.R. McVeigh, J.P.Leal, C. Davatzikos, J.J. Frost, "Measurement of Tracer Concentration in Brain Gray Matter Using Positron Emission Tomography: MRI-Based Correction for Partial Volume Effects", J. Cerebral Blood Flow and Metabolism, 12(4):571-583, 1992.




   






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