Difference between revisions of "Publications/2020"
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{{iacl-pub| author= A.G. Filippatou, E.S. Vasileiou, Y. He, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, M.A. Mealy, M. Levy, Y. Liu, J.L. Prince, E.M. Mowry, S. Saidha, P.A. Calabresi, and E.S. Sotirchos| title = Evidence of subclinical quantitative retinal layer abnormalities in AQP4-IgG seropositive NMOSD| journal = Multiple Sclerosis Journal| number = 1352458520977771| when = 2020| doi = 10.1177/1352458520977771}} | {{iacl-pub| author= A.G. Filippatou, E.S. Vasileiou, Y. He, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, M.A. Mealy, M. Levy, Y. Liu, J.L. Prince, E.M. Mowry, S. Saidha, P.A. Calabresi, and E.S. Sotirchos| title = Evidence of subclinical quantitative retinal layer abnormalities in AQP4-IgG seropositive NMOSD| journal = Multiple Sclerosis Journal| number = 1352458520977771| when = 2020| doi = 10.1177/1352458520977771}} | ||
{{iacl-pub| author = A.G. Filippatou, M. Moniruzzaman, E.S. Sotirchos, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, E. Vasileiou, S. Saidha, J.L. Prince, N. Haughey, P.A. Calabresi, and P. Bhargava| title = Serum ceramide levels are altered in multiple sclerosis| journal = Multiple Sclerosis Journal, number = 1352458520971816| when = 2020| doi = 10.1177/1352458520971816}} | {{iacl-pub| author = A.G. Filippatou, M. Moniruzzaman, E.S. Sotirchos, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, E. Vasileiou, S. Saidha, J.L. Prince, N. Haughey, P.A. Calabresi, and P. Bhargava| title = Serum ceramide levels are altered in multiple sclerosis| journal = Multiple Sclerosis Journal, number = 1352458520971816| when = 2020| doi = 10.1177/1352458520971816}} | ||
| − | {{iacl-pub| author = H. Yang, J. Sun, A. Carass, C. Zhao, J. Lee, J.L. Prince, and Z. Xu| title = Unsupervised MR-to-CT Synthesis using Structure-Constrained CycleGAN| jrnl = tmi| number = 39(12):4249-4261| when = 2020 | doi = 10.1109/TMI.2020.3015379}} | + | {{iacl-pub| author = H. Yang, J. Sun, A. Carass, C. Zhao, J. Lee, J.L. Prince, and Z. Xu| title = Unsupervised MR-to-CT Synthesis using Structure-Constrained CycleGAN| jrnl = tmi| number = 39(12):4249-4261| when = 2020 | doi = 10.1109/TMI.2020.3015379 | pubmed = 32780700}} |
{{iacl-pub | author = E.S. Sotirchos, A. Filippatou, K.C. Fitzgerald, S. Salama, S. Pardo, J. Wang, E. Ogbuokiri, N.J. Cowley, N. Pellegrini, O.C. Murphy, M.A. Mealy, J.L. Prince, M. Levy, P.A. Calabresi, S. Saidha| title = Aquaporin-4 IgG seropositivity is associated with worse visual outcomes after optic neuritis than MOG-IgG seropositivity and multiple sclerosis, independent of macular ganglion cell layer thinning| journal = Multiple Sclerosis Journal| number =26(11):1360-1371| when = 2021| doi = 10.1177/1352458519864928}} | {{iacl-pub | author = E.S. Sotirchos, A. Filippatou, K.C. Fitzgerald, S. Salama, S. Pardo, J. Wang, E. Ogbuokiri, N.J. Cowley, N. Pellegrini, O.C. Murphy, M.A. Mealy, J.L. Prince, M. Levy, P.A. Calabresi, S. Saidha| title = Aquaporin-4 IgG seropositivity is associated with worse visual outcomes after optic neuritis than MOG-IgG seropositivity and multiple sclerosis, independent of macular ganglion cell layer thinning| journal = Multiple Sclerosis Journal| number =26(11):1360-1371| when = 2021| doi = 10.1177/1352458519864928}} | ||
{{iacl-pub| author = A.K. Knutsen, A.D. Gomez, M. Gangolli, W.T. Wang, D. Chan, Y.C. Lu, E. Christoforou, J.L. Prince, P.V. Bayly, J.A. Butman, D.L. Pham|title = In vivo estimates of axonal stretch and 3D brain deformation during mild head impact| journal = Brain Multiphysics| number = 100015| when = 2020| doi = 10.1016/j.brain.2020.100015}} | {{iacl-pub| author = A.K. Knutsen, A.D. Gomez, M. Gangolli, W.T. Wang, D. Chan, Y.C. Lu, E. Christoforou, J.L. Prince, P.V. Bayly, J.A. Butman, D.L. Pham|title = In vivo estimates of axonal stretch and 3D brain deformation during mild head impact| journal = Brain Multiphysics| number = 100015| when = 2020| doi = 10.1016/j.brain.2020.100015}} | ||
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{{iacl-pub| author = L. Zuo, B.E. Dewey, A. Carass, Y. He, M. Shao, J.C. Reinhold, and J.L. Prince| title = Synthesize Realistic MR Images with Noise Control| conf = sashimi2020 | doi = 10.1007/978-3-030-59520-3_3| youtube = JM56ltw9m50}} | {{iacl-pub| author = L. Zuo, B.E. Dewey, A. Carass, Y. He, M. Shao, J.C. Reinhold, and J.L. Prince| title = Synthesize Realistic MR Images with Noise Control| conf = sashimi2020 | doi = 10.1007/978-3-030-59520-3_3| youtube = JM56ltw9m50}} | ||
{{iacl-pub| author = B.E. Dewey, L. Zuo, A. Carass, Y. He, J.C. Reinhold, Y. Liu, E. Mowry, S. Newsome, J. Oh, P.A. Calabresi, and J.L. Prince| title = A Disentangled Latent Space for Cross-Site MRI Harmonization| conf = miccai2020 | doi = 10.1007/978-3-030-59728-3_70| youtube = zVWIX75rYZM}} | {{iacl-pub| author = B.E. Dewey, L. Zuo, A. Carass, Y. He, J.C. Reinhold, Y. Liu, E. Mowry, S. Newsome, J. Oh, P.A. Calabresi, and J.L. Prince| title = A Disentangled Latent Space for Cross-Site MRI Harmonization| conf = miccai2020 | doi = 10.1007/978-3-030-59728-3_70| youtube = zVWIX75rYZM}} | ||
| − | {{iacl-pub| author = Y. He, A. Carass, L. Zuo, B.E. Dewey, and J.L. Prince| title = Self domain adapted network| conf = miccai2020 | doi = 10.1007/978-3-030-59710-8_43| youtube = NMiQfM3KUtM}} | + | {{iacl-pub| author = Y. He, A. Carass, L. Zuo, B.E. Dewey, and J.L. Prince| title = Self domain adapted network| conf = miccai2020 | doi = 10.1007/978-3-030-59710-8_43| arXiv = 2007.03162| youtube = NMiQfM3KUtM}} |
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| − | {{iacl-pub| author = J Lambe, A Rothman, J Prince, S Saidha, | + | {{iacl-pub| author = J. Lambe, A. Rothman, J. Prince, S. Saidha, P.A. Calabresi, S.D. Newsome | title = Retinal pathology occurs in stiff-person syndrome | journal = Neurology | number = 94(20):e2126-e2131 | when = 2020 | doi = 10.1212/WNL.0000000000008943}} |
{{iacl-pub| author=S. Han, Y. An, A. Carass, J.L. Prince, and S.M. Resnick| title = Longitudinal analysis of regional cerebellum volumes during normal aging| jrnl = ni| number = 220:117062| when = 2020| doi = 10.1016/j.neuroimage.2020.117062| pubmed = 32592850}} | {{iacl-pub| author=S. Han, Y. An, A. Carass, J.L. Prince, and S.M. Resnick| title = Longitudinal analysis of regional cerebellum volumes during normal aging| jrnl = ni| number = 220:117062| when = 2020| doi = 10.1016/j.neuroimage.2020.117062| pubmed = 32592850}} | ||
{{iacl-pub|author=A. Carass, S. Roy, A. Gherman, J.C. Reinhold, A. Jesson, T. Arbel, O. Maier, H. Handels, M. Ghafoorian, B. Platel, A. Birenbaum, H. Greenspan, D.L. Pham, C.M. Crainiceanu, P.A. Calabresi, J.L. Prince, W.R. Gray Roncal, R.T. Shinohara, and I. Oguz| title=Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis| journal=Nature Scientific Reports| number=10:8242| when=2020| doi=10.1038/s41598-020-64803-w|pubmed=32427874}} | {{iacl-pub|author=A. Carass, S. Roy, A. Gherman, J.C. Reinhold, A. Jesson, T. Arbel, O. Maier, H. Handels, M. Ghafoorian, B. Platel, A. Birenbaum, H. Greenspan, D.L. Pham, C.M. Crainiceanu, P.A. Calabresi, J.L. Prince, W.R. Gray Roncal, R.T. Shinohara, and I. Oguz| title=Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis| journal=Nature Scientific Reports| number=10:8242| when=2020| doi=10.1038/s41598-020-64803-w|pubmed=32427874}} | ||
| − | {{iacl-pub| author=S. Han, A. Carass, Y. He, and J.L. Prince| title = [[Cerebellum CNN|Automatic Cerebellum Anatomical Parcellation using U-Net with Locally Constrained Optimization]]| jrnl = ni| number = 218:116819| when=2020| doi = 10.1016/j.neuroimage.2020.116819}} | + | {{iacl-pub| author = S. Han, A. Carass, Y. He, and J.L. Prince | title = [[Cerebellum CNN|Automatic Cerebellum Anatomical Parcellation using U-Net with Locally Constrained Optimization]] | jrnl = ni | number = 218:116819 | when = 2020| doi = 10.1016/j.neuroimage.2020.116819 | pubmed = 32438049 }} |
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| − | {{iacl-pub| author=J.C. Reinhold, Y. He, S. Han, Y. Chen, D. Gao, J. Lee, J.L. Prince, and A. Carass| title=Validating uncertainty in medical image translation| conf=isbi2020| doi=10.1109/ISBI45749.2020.9098543| youtube=9Xu0w18JGW8}} | + | {{iacl-pub| author = J.C. Reinhold, Y. He, S. Han, Y. Chen, D. Gao, J. Lee, J.L. Prince, and A. Carass| title = Validating uncertainty in medical image translation| conf = isbi2020| doi = 10.1109/ISBI45749.2020.9098543| arXiv = 2002.04639 | youtube = 9Xu0w18JGW8}} |
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{{iacl-pub| author=Y. He, A. Carass, Y. Liu, S. Saidha, P.A. Calabresi, and J.L. Prince| title=Adversarial domain adaptation for multi-device retinal OCT segmentation| conf=spie2020| doi=10.1117/12.2549839}} | {{iacl-pub| author=Y. He, A. Carass, Y. Liu, S. Saidha, P.A. Calabresi, and J.L. Prince| title=Adversarial domain adaptation for multi-device retinal OCT segmentation| conf=spie2020| doi=10.1117/12.2549839}} | ||
| − | {{iacl-pub| author=J.C. Reinhold, Y. He, S. Han, Y. Chen, D. Gao, J. Lee, J.L. Prince, and A. Carass|title=Finding novelty with uncertainty|conf=spie2020|doi=10.1117/12.2549341}} | + | {{iacl-pub| author=J.C. Reinhold, Y. He, S. Han, Y. Chen, D. Gao, J. Lee, J.L. Prince, and A. Carass|title=Finding novelty with uncertainty|conf=spie2020|doi=10.1117/12.2549341 | arXiv = 2002.04626}} |
{{iacl-pub| author=Y. Liu, L. Zuo, A. Carass, Y. He, A. Filippatou, S.D. Solomon, S. Saidha, P.A. Calabresi, and J.L. Prince| title=Variational intensity cross channel encoder for unsupervised vessel segmentation on OCT angiography| conf=spie2020| doi=10.1117/12.2549967}} | {{iacl-pub| author=Y. Liu, L. Zuo, A. Carass, Y. He, A. Filippatou, S.D. Solomon, S. Saidha, P.A. Calabresi, and J.L. Prince| title=Variational intensity cross channel encoder for unsupervised vessel segmentation on OCT angiography| conf=spie2020| doi=10.1117/12.2549967}} | ||
{{iacl-pub| author=J. Woo, F. Xing, J.L. Prince, M. Stone, T. Reese, V. Wedeen, G. El Fakhri| title=Identifying the common and subject-specific functional units of speech movements via a joint sparse non-negative matrix factorization framework| conf=spie2020| doi=10.1117/12.2548991| pubmed=32454553| pmcid=7243345}} | {{iacl-pub| author=J. Woo, F. Xing, J.L. Prince, M. Stone, T. Reese, V. Wedeen, G. El Fakhri| title=Identifying the common and subject-specific functional units of speech movements via a joint sparse non-negative matrix factorization framework| conf=spie2020| doi=10.1117/12.2548991| pubmed=32454553| pmcid=7243345}} | ||
Latest revision as of 02:56, 17 September 2022
2020
- A.G. Filippatou, E.S. Vasileiou, Y. He, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, M.A. Mealy, M. Levy, Y. Liu, J.L. Prince, E.M. Mowry, S. Saidha, P.A. Calabresi, and E.S. Sotirchos, "Evidence of subclinical quantitative retinal layer abnormalities in AQP4-IgG seropositive NMOSD", Multiple Sclerosis Journal, 1352458520977771, 2020. (doi)
- A.G. Filippatou, M. Moniruzzaman, E.S. Sotirchos, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, E. Vasileiou, S. Saidha, J.L. Prince, N. Haughey, P.A. Calabresi, and P. Bhargava, "Serum ceramide levels are altered in multiple sclerosis", Multiple Sclerosis Journal, number = 1352458520971816, 2020. (doi)
- H. Yang, J. Sun, A. Carass, C. Zhao, J. Lee, J.L. Prince, and Z. Xu, "Unsupervised MR-to-CT Synthesis using Structure-Constrained CycleGAN", IEEE Trans. on Medical Imaging, 39(12):4249-4261, 2020. (doi) (PubMed)
- E.S. Sotirchos, A. Filippatou, K.C. Fitzgerald, S. Salama, S. Pardo, J. Wang, E. Ogbuokiri, N.J. Cowley, N. Pellegrini, O.C. Murphy, M.A. Mealy, J.L. Prince, M. Levy, P.A. Calabresi, S. Saidha, "Aquaporin-4 IgG seropositivity is associated with worse visual outcomes after optic neuritis than MOG-IgG seropositivity and multiple sclerosis, independent of macular ganglion cell layer thinning", Multiple Sclerosis Journal, 26(11):1360-1371, 2021. (doi)
- A.K. Knutsen, A.D. Gomez, M. Gangolli, W.T. Wang, D. Chan, Y.C. Lu, E. Christoforou, J.L. Prince, P.V. Bayly, J.A. Butman, D.L. Pham, "In vivo estimates of axonal stretch and 3D brain deformation during mild head impact", Brain Multiphysics, 100015, 2020. (doi)
- J Oh, M Chen, K Cybulsky, S Suthiphosuwan, E Seyman, B Dewey, M. Diener-West, P. van Zijl, J. Prince, D.S. Reich, and P.A. Calabresi, "Five-year longitudinal changes in quantitative spinal cord MRI in multiple sclerosis", Multiple Sclerosis Journal, 1352458520923970, 2020. (doi)
- E.S. Sotirchos, N. Gonzalez Caldito, A. Filippatou, K.C. Fitzgerald, O.C. Murphy, J. Lambe, J. Nguyen, J. Button, E. Ogbuokiri, C.M. Crainiceanu, J.L. Prince, P.A. Calabresi, S. Saidha, and International Multiple Sclerosis Visual System (IMSVISUAL) Consortium, "Progressive multiple sclerosis is associated with faster and specific retinal layer atrophy", Annals of Neurology, 87(6):885-896, 2020. (doi)
- O.C. Murphy, O. Kwakyi, M. Iftikhar, S. Zafar, J. Lambe, N. Pellegrini, E.S. Sotircho, N. Gonzalez-Caldito, E. Ogbuokiri, A. Filippatou, H. Risher, N. Cowley, S. Feldman, N. Fioravante, E.M. Frohman, T.C. Frohman, L.J. Balcer, J.L. Prince, R. Channa, P.A. Calabresi, S. Saidha, "Alterations in the retinal vasculature occur in multiple sclerosis and exhibit novel correlations with disability and visual function measures", Multiple Sclerosis Journal, 26(7):815-828, 2020. (doi)
- M. Shao, A. Carass, A.D. Gomez, J. Zhuo, X. Liang, M. Stone, and J.L. Prince, "Direct reconstruction of crossing muscle fibers in the human tongue using a deep neural network", International Workshop on Computational Diffusion MRI (CDMRI 2020), Lima Peru, October 8, 2020.
- S. Han, J.L. Prince, and A. Carass, "Inhomogeneity Correction in Magnetic Resonance Images Using Deep Image Priors", 11th International Workshop on Machine Learning in Medical Imaging (MLMI 2020), Lima Peru, October 4, 2020. (doi)
- L. Zuo, B.E. Dewey, A. Carass, Y. He, M. Shao, J.C. Reinhold, and J.L. Prince, "Synthesize Realistic MR Images with Noise Control", Simulation and Synthesis in Medical Imaging (SASHIMI 2020) in conjunction with the 23rd International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2020), Lima, Peru, October 4 - 8, 2020. (doi)
- B.E. Dewey, L. Zuo, A. Carass, Y. He, J.C. Reinhold, Y. Liu, E. Mowry, S. Newsome, J. Oh, P.A. Calabresi, and J.L. Prince, "A Disentangled Latent Space for Cross-Site MRI Harmonization", 23rd International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2020), Lima, Peru, October 4 - 8, 2020. (doi)
- Y. He, A. Carass, L. Zuo, B.E. Dewey, and J.L. Prince, "Self domain adapted network", 23rd International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2020), Lima, Peru, October 4 - 8, 2020. (doi)
- J. Lambe, A. Rothman, J. Prince, S. Saidha, P.A. Calabresi, S.D. Newsome, "Retinal pathology occurs in stiff-person syndrome", Neurology, 94(20):e2126-e2131, 2020. (doi)
- S. Han, Y. An, A. Carass, J.L. Prince, and S.M. Resnick, "Longitudinal analysis of regional cerebellum volumes during normal aging", NeuroImage, 220:117062, 2020. (doi) (PubMed)
- A. Carass, S. Roy, A. Gherman, J.C. Reinhold, A. Jesson, T. Arbel, O. Maier, H. Handels, M. Ghafoorian, B. Platel, A. Birenbaum, H. Greenspan, D.L. Pham, C.M. Crainiceanu, P.A. Calabresi, J.L. Prince, W.R. Gray Roncal, R.T. Shinohara, and I. Oguz, "Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis", Nature Scientific Reports, 10:8242, 2020. (doi) (PubMed)
- S. Han, A. Carass, Y. He, and J.L. Prince, "Automatic Cerebellum Anatomical Parcellation using U-Net with Locally Constrained Optimization", NeuroImage, 218:116819, 2020. (doi) (PubMed)
- J.C. Reinhold, Y. He, S. Han, Y. Chen, D. Gao, J. Lee, J.L. Prince, and A. Carass, "Validating uncertainty in medical image translation", 17th IEEE International Symposium on Biomedical Imaging (ISBI 2020), Iowa City, IA, April 3 - 7, 2020. (doi)
- Y. He, A. Carass, Y. Liu, S. Saidha, P.A. Calabresi, and J.L. Prince, "Adversarial domain adaptation for multi-device retinal OCT segmentation", Proceedings of SPIE Medical Imaging (SPIE-MI 2020), Houston, TX, February 15 - 20, 2020. (doi)
- J.C. Reinhold, Y. He, S. Han, Y. Chen, D. Gao, J. Lee, J.L. Prince, and A. Carass, "Finding novelty with uncertainty", Proceedings of SPIE Medical Imaging (SPIE-MI 2020), Houston, TX, February 15 - 20, 2020. (doi)
- Y. Liu, L. Zuo, A. Carass, Y. He, A. Filippatou, S.D. Solomon, S. Saidha, P.A. Calabresi, and J.L. Prince, "Variational intensity cross channel encoder for unsupervised vessel segmentation on OCT angiography", Proceedings of SPIE Medical Imaging (SPIE-MI 2020), Houston, TX, February 15 - 20, 2020. (doi)
- J. Woo, F. Xing, J.L. Prince, M. Stone, T. Reese, V. Wedeen, G. El Fakhri, "Identifying the common and subject-specific functional units of speech movements via a joint sparse non-negative matrix factorization framework", Proceedings of SPIE Medical Imaging (SPIE-MI 2020), Houston, TX, February 15 - 20, 2020. (doi) (PubMed) (PMCID 7243345)
- S. Han, J.L. Prince, and A. Carass, "Reflection-equivariant convolutional neural networks improve segmentation over reflection augmentation", Proceedings of SPIE Medical Imaging (SPIE-MI 2020), Houston, TX, February 15 - 20, 2020. (doi)
- Y. He, A. Carass, Y. Liu, A. Filippatou, B.M. Jedynak, S.D. Solomon, S. Saidha, P.A. Calabresi, and J.L. Prince, "Segmenting retinal OCT images with inter-B-scan and longitudinal information", Proceedings of SPIE Medical Imaging (SPIE-MI 2020), Houston, TX, February 15 - 20, 2020. (doi)
