Prince/Publications/Journal

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Jerry L. Prince: Journal Publications

• P.-L. Bazin, C. Ye, J.A. Bogovic, N. Shiee, D.S. Reich, J.L. Prince, and D.L. Pham, "Direct segmentation of the major white matter tracts in diffusion tensor images", NeuroImage, 58(2):458-468, September 2011. (doi) (PubMed)
• A. Carass, J. Cuzzocreo, M.B. Wheeler, P.-L. Bazin, S.M. Resnick, and J.L. Prince, "Simple paradigm for extra-cerebral tissue removal: Algorithm and analysis", NeuroImage, 56(4):1982-1992, June 2011. (doi) (PubMed) (PMCID 3105165)
• J. Bian, J.H. Siewerdsen, X. Han, E.Y. Sidky, J.L. Prince, C.A. Pelizzari, and X. Pan, "Evaluation of sparse-view reconstruction from flat-panel-detector cone-beam CT", Physics in Medicine and Biology, 55(22):6575-6599, October 2010.
• D.L. Pham, P.-L. Bazin, and J.L. Prince, "Digital Topology in Brain Imaging", Signal Processing Magazine, 27(4):51-59, 2010.
• M. Thambisetty, J. Wan, A. Carass, Y. An, J.L. Prince, and S.M. Resnick, "Longitudinal changes in cortical thickness associated with normal aging", NeuroImage, 52(4):1215-1223, October 2010.
• H. Agarwal, J.L. Prince, and K. Abd-Elmoniem, "Total Removal of Unwanted Harmonic Peaks (TruHARP) MRI for single breath-hold high-resolution myocardial motion and strain quantification", Magnetic Resonance in Medicine, 64(2):574-585, August 2010.
• M. Stone, X. Liu, H. Chen, and J. Prince, "A preliminary application of principal components and cluster analysis to internal tongue deformation patterns", Computer Methods in Biomechanics and Biomedical Engineering, 13(4):493-503, July 2010.
• X. Liu and J.L. Prince, "Shortest path refinement for motion estimation from tagged MR images", IEEE Trans Med Imaging, 29(8):1560-1572, March 2010.
• Z.X. Du, B.A. Landman, D.S. Zee, S. Mori, J.L. Prince, and S.H. Ying, "Diffusion Tensor Imaging Reveals Disease-Specific Deep Dentate Nucleus Changes in Cerebellar Degeneration", Journal of Neurology, 257(8):1407-1408, March 2010.
• B.C. Lucas, J.A. Bogovic, A. Carass, P.-L. Bazin, J.L. Prince, D.L. Pham, and B.A. Landman, "The Java Image Science Toolkit (JIST) for Rapid Prototyping and Publishing of Neuroimaging Software", Neuroinformatics, 8:5-17, March 2010. (doi) (PubMed)
• N. Shiee, P.-L. Bazin, A. Ozturk, D.S. Reich, P.A. Calabresi, and D.L. Pham, "A Topology-Preserving Approach to the Segmentation of Brain Images with Multiple Sclerosis Lesions", NeuroImage, 49(2):1524-1535, January 2010. (doi) (PubMed) (PMCID 2806481)
• L.M. Ellingsen, G. Chintalapani, R.H. Taylor, and J.L. Prince, "Robust deformable image registration using prior shape information for atlas to patient registration", Comput. Med. Imaging Graph, 34(1):79-90, January 2010. (PubMed)
• J. Lee, X. Liu, A.K. Jain, D.Y. Song, E.C. Burdette, J.L. Prince, and G. Fichtinger, "Prostate Brachytherapy Seed Reconstruction with Gaussian Blurring and Optimal Coverage Cost", IEEE Trans. on Medical Imaging, 28(12):1955-1968, December 2009. (doi) (PubMed)
• K.R. Rocha, G. Sundaramoorthi, A.J. Yezzi, and J.L. Prince, "3D Topology Preserving Flows for Viewpoint-Based Cortical Unfolding", Int. J. Comput. Vis., 85(3):223-236, December 2009. (doi) (PubMed) (PMCID 2786089)
• S.H. Ying, B.A. Landman, S. Chowdhury, A.H. Sinofsky, A. Gambini, S. Mori, D.S. Zee, and J.L. Prince, "Orthogonal diffusion-weighted MRI measures distinguish region-specific degeneration in cerebellar ataxia subtypes", J. Neurol., 256(11):1939-1942, November 2009. (doi) (PubMed) (PMCID 2789274)
• B.A. Landman, P.-L. Bazin, S.A. Smith, and J.L. Prince, "Robust Estimation of Spatially Variable Noise Fields", Magnetic Resonance in Medicine, 62(2):500-509, August 2009. (doi) (PubMed) (PMCID 2806192)
• L.M. Ellingsen and J.L. Prince, "Mjolnir:Extending HAMMER Using a Diffusion Transformation Model and Histogram Equalization for Deformable Image Registration", Int. J. Biomed. Imaging, 2009:281615, August 2009. (doi) (PubMed) (PMCID 2724857)
• X. Han, C. Xu, and J.L. Prince, "A Moving Grid Framework for Geometric Deformable Models", Int. J. Comput. Vis., 84(1):63-79, August 2009. (doi) (PubMed) (PMCID 2784682)
• B.A. Landman, P.-L. Bazin, and J.L. Prince, "Estimation and Application of Spatially Variable Noise Fields in Diffusion Tensor Imaging", Journal of Magnetic Resonance Imaging, 27(6):741-751, July 2009. (doi) (PubMed) (PMCID 2733233)
• Y. Bai, X. Han, and J.L. Prince, "Digital Topology on Adaptive Octree Grids", J. Math Imaging Vis., 34(2):165-184, June 2009. (doi) (PubMed) (PMCID 2805029)
• S. Sampath, N.F. Osman, and J.L. Prince, "A combined harmonic phase and strain-encoded pulse sequence for measuring three-dimensional strain", Magnetic Resonance Imaging, 27(1):55-61, January 2009. (doi) (PubMed) (PMCID 2599804)
• K.Z. Abd-Elmoniem, M. Stuber, and J.L. Prince, "Direct Three-Dimensional Myocardial Strain Tensor Quantification and Tracking using zHARP", Medical Image Analysis, 12(6):778-786, December 2008. (doi) (PubMed) (PMCID 2590624)
• D. Tosun and J.L. Prince, "A Geometry-Driven Optical Flow Warping for Spatial Normalization of Cortical Surfaces", IEEE Trans. on Medical Imaging, 27(12):1739-1753, December 2008. (doi) (PubMed) (PMCID 2597639)
• B.A. Landman, J. Farrell, H. Huang, J.L. Prince, and S. Mori, "Diffusion Tensor Imaging at Low SNR:Non-monotonic behaviors of tensor contrasts", Magnetic Resonance Imaging, 26(6):790-800, July 2008. (doi) (PubMed) (PMCID 2583784)
• K.Z. Abd-Elmoniem, S. Sampath, N.F. Osman, and J.L. Prince, "Real-Time Monitoring of Cardiac Regional Function Using FastHARP MRI and Region-of-Interest Reconstruction", IEEE Trans. on Biomedical Engineering, 54(9):1650-1656, September 2007. (doi) (PubMed)
• J.A. Farrell, B.A. Landman, C.K. Jones, S.A. Smith, J.L. Prince, P.C. van Zijl, and S. Mori, "Effects of SNR on the Accuracy and Reproducibility of DTI-derived Fractional Anisotropy, Mean Diffusivity, and Principal Eigenvector Measurements at 1.5T", Journal of Magnetic Resonance Imaging, 26(3):756-767, August 2007. (PubMed)
• B.A. Landman, J.A. Farrell, C.K. Jones, S.A. Smith, J.L. Prince, P.C. van Zijl, and S. Mori, "Effects of Diffusion Weighting Schemes on the Reproducibility of DTI-derived Fractional Anisotropy, Mean Diffusivity, and Principal Eigenvector Measurements at 1.5T", NeuroImage, 36(4):1123-1138, July 2007.
• K.Z. Abd-Elmoniem, N.F. Osman, J.L. Prince, and M. Stuber, "Three-Dimensional Magnetic Resonance Myocardial Motion Tracking From a Single Image Plane", Magnetic Resonance in Medicine, 58(1):92-102, July 2007. (doi) (PubMed)
• K. Rocha, A. Yezzi, and J.L. Prince, "A Hybrid Eulerian-Lagrangian Approach for Thickness, Correspondence, and Gridding of Annular Tissues", IEEE Transactions on Image Processing, 16(3):636-648, March 2007. (doi) (PubMed)
• S. Sampath and J.L. Prince, "Automatic 3D Tracking of Cardiac Material Markers Using Slice-Following and Harmonic Phase MRI", Magnetic Resonance Imaging, 25(2):197-208, February 2007. (doi)
• V. Parthasarathy, J.L. Prince, M. Stone, E. Murano, and M. NessAiver, "Measuring tongue motion from tagged Cine-MRI using harmonic phase (HARP) processing", Journal of Acoustic Society of America, 121(1):491-504, 2007. (PubMed)
• X. Han, C. Xu, and J.L. Prince, "Fast numerical scheme for gradient vector flow computation using a multigrid method", IET Image Processing, 1(1):48-55, March 2007. (doi)
• M.E. Rettmann, M.A. Kraut, J.L. Prince, and S.M. Resnick, "Cross-Sectional and Longitudinal Analyses of Anatomical Sulcal Changes Associated with Aging", Cerebral Cortex, 16(11):1584-1594, November 2006. (doi)
• D. Tosun, M.E. Rettmann, D.Q. Naiman, S.M. Resnick, M.A. Kraut, J.L. Prince, "Cortical Reconstruction Using Implicit Surface Evolution: Accuracy and Precision Analysis", NeuroImage, 29(3):838-852, February 2006. (doi)
• V. Parthasarathy, M. Stone, and J.L. Prince, "Spatiotemporal Visualization of the Tongue Surface using Ultrasound and Kriging (SURFACES)", Clinical Linguistics and Phonetics, 19(6/7):529-544, September - November 2005. (PubMed)
• L. Pan, J.L. Prince, J.A.C. Lima, and N.F. Osman, "Fast tracking of cardiac motion using 3D-HARP", IEEE Trans. on Biomedical Engineering, 52(8):1425-1435, August 2005. (doi) (PubMed)
• M.E. Rettmann, D. Tosun, X. Tao, S.M. Resnick, and J.L. Prince, "Program for the Assisted Labeling of Sulcal Regions (PALS): Description and Reliability", NeuroImage, 24(2):398–416, 15 January 2005. (doi)
• J. Garot, J.A. Lima, B.L. Gerber, S. Sampath, K.C. Wu, D.A. Bluemke, J.L. Prince, N.F. Osman, "Spatially resolved imaging of myocardial function with strain-encoded MR: comparison with delayed contrast-enhanced MR imaging after myocardial infarction", Radiology, 233(2):596-602, November 2004. (doi)
• X. Han, D.L. Pham, D. Tosun, M.E. Rettmann, C. Xu, and J. L. Prince, "CRUISE: Cortical Reconstruction Using Implicit Surface Evolution", NeuroImage, 23(3):997–1012, November 2004. (doi)
• D. Tosun, M.E. Rettmann, X. Han, X. Tao, C. Xu, S.M. Resnick, D. Pham, and J.L. Prince, "Cortical Surface Segmentation and Mapping", NeuroImage, 23:S108–S118, 2004. (doi) (PubMed)
• D. Tosun and J.L. Prince, "Mapping Techniques for Aligning Sulci Across Multiple Brains", Medical Image Analysis, 8:295–309, 2004. (doi)
• N.F. Osman and J.L. Prince, "Regenerating MR tagged images using harmonic phase (HARP) methods", IEEE Trans. on Biomedical Engineering, 51(8):1428–1433, August 2004. (doi) (PubMed)
• A. Yezzi and J.L. Prince, "An Eulerian PDE approach for computing tissue thickness", IEEE Trans. on Medical Imaging, 22(10):1332–1339, October 2003. (doi) (PubMed)
• M. NessAiver and J.L. Prince, "Magnitude Image CSPAMM Reconstruction (MICSR)", Magnetic Resonance in Medicine, 50(2):331–342, August 2003. (doi)
• S. Sampath, J.A. Derbyshire, E. Atalar, N.F. Osman, and J.L. Prince, "Real-Time Imaging of Two-dimensional Cardiac Strain Using a Harmonic Phase Magnetic Resonance Imaging (HARP-MRI) Pulse Sequence", Magnetic Resonance in Medicine, 50(1):154–163, July 2003. (doi) (PubMed)
• X. Han, C. Xu, and J.L. Prince, "A topology preserving level set method for geometric deformable models", IEEE Trans. on Pattern Analysis Machine Intelligence, 25(6):755-768, June 2003. (doi)
• D.L. Kraitchman, S. Sampath, E. Castillo, J.A. Derbyshire, D.A. Bluemke, B.L. Gerber, J.L. Prince, N.F. Osman, "Quantitative Ischemia Detection During Cardiac Magnetic Resonance Stress Testing Using Real-time FastHARP", Circulation, 107(15):2025-2030, 22 April 2003. (doi)
• W.S. Kerwin and J.L. Prince, "Kriging Filters for Space Time Interpolation", Advances in Imaging and Electron Physics, 124:139-193, November 2002.
• X. Tao, J.L. Prince, and C. Davatzikos, "Using a statistical shape model to extract sulcal curves on the outer cortex of the human brain", IEEE Trans. on Medical Imaging, 21(5):513-524, May 2002. (doi) (PubMed)
• X. Han, C. Xu, U. Braga-Neto, and J.L. Prince, "Topology correction in brain cortex segmentation using a multiscale, graph-based algorithm", IEEE Trans. on Medical Imaging, 21(2):109-121, February 2002. (doi) (PubMed)
• M.E. Rettman, X. Han, and J.L. Prince, "Automated Sulcal Segmentation Using Watersheds on the Cortical Surface", NeuroImage, 15(2):329-344, February 2002. (doi) (PubMed)
• N.F. Osman, S. Sampath, E. Atalar, and J.L. Prince, "Imaging longitudinal cardiac strain on short-axis images using strain-encoded MRI", Magnetic Resonance in Medicine, 46(2):324-334, 2001. (doi) (PubMed)
• J. Garot, D.A. Bluemke, N.F. Osman, C.E. Rochitte, E.A. Zerhouni, J.L. Prince, and J.C. Lima, "Transmural Contractile Reserve After Reperfused Myocardial Infarction in Dogs", Journal of the American College of Cardiology, 36(7):2339-2346, 2000.
• W.S. Kerwin and J.L. Prince, "On the Optimality of Recursive Unbiased State Estimation with Unknown Inputs", Automatica, 36(9):1381-1383, September 2000. (doi)
• N.F. Osman and J.L. Prince, "Visualizing myocardial function using HARP MRI", Physics in Medicine and Biology, 45(6):1665-1682, June 2000. (doi) (PubMed)
• N.F. Osman, E.R. McVeigh, and J.L. Prince, "Imaging heart motion using harmonic phase MRI", IEEE Trans. on Medical Imaging, 19(3):186-202, March 2000. (doi) (PubMed)
• J. Garot, D.A. Bluemke, N.F. Osman, C.E. Rochitte, E.R. McVeigh, E.A. Zerhouni, J.L. Prince, and J.A. Lima, "Fast Determination of Regional Myocardial Strain Fields from Tagged Cardiac Images Using Harmonic Phase (HARP) MRI", Circulation, 101(9):981-988, Mar 7, 2000. (PubMed)
• W.S. Kerwin and J.L. Prince, "A k-space Analysis of MR Tagging", Journal of Magnetic Resonance, 142(2):313-322, 2000. (doi)
• J.L. Prince, S.N. Gupta, and N.F. Osman, "Bandpass Optical Flow For Tagged MRI", Medical Physics, 27(1):108-118, January 2000. (PubMed)
• N.F. Osman, W.S. Kerwin, E.R. McVeigh, and J.L. Prince, "Cardiac Motion Tracking Using CINE Harmonic Phase (HARP) Magnetic Resonance Imaging", Magnetic Resonance in Medicine, 42(6):1048-1060, 1999. (PubMed)
• D.L. Pham and J.L. Prince, "Adaptive Fuzzy Segmentation of Magnetic Resonance Images", IEEE Trans. on Medical Imaging, 18(9):737-752, September 1999. (doi) (PubMed)
• W. S. Kerwin and J.L. Prince, "The Kriging Update Model and Recursive Space-Time Function Estimation", IEEE Trans. on Signal Processing, 47(11):2942-2952, November 1999. (doi)
• C. Xu, D. L. Pham, M.E. Rettmann, D. N. Yu, and J.L. Prince, "Reconstruction of the human cerebral cortex from magnetic resonance images", IEEE Trans. on Medical Imaging, 18(6):467-480, June 1999. (doi) (PubMed)
• W.S. Kerwin and J.L. Prince, "Tracking MR tag surfaces using a spatio-temporal filter and interpolator", Int'l Journal of Imaging Systems and Technology, 10(2):128-142, March 1999.
• D.L. Pham and J.L. Prince, "An Adaptive Fuzzy C-Means Algorithm for Image Segmentation in the Presence of Intensity Inhomogeneities", Pattern Recognition Letters, 20(1):57-68, 15 January, 1999. (doi)
• C.A. Davatzikos and J.L. Prince, "Convexity Analysis of Active Contour Algorithms", Image and Vision Computing, 17(1):27-36, January 1999.
• W. Kerwin and J.L. Prince, "Cardiac Material Markers from Tagged MR Images", Medical Image Analysis, 2(4):339-353, 1998. (doi) (PubMed)
• C. Xu and J.L. Prince, "Generalized Gradient Vector Flow External Forces for Active Contours", Signal Processing, 71(2):131-139, December 1998. (doi)
• C. Xu and J.L. Prince, "Snakes, shapes, and gradient vector flow", IEEE Trans. on Image Processing, 7(3):359-369, March 1998. (doi) (PubMed)
• N. Osman and J.L. Prince, "3-D Vector Tomography on Bounded Domains", Inverse Problems, 14(1):185-196, February 1998. (doi)
• D.L. Pham, J.L. Prince, A.P. Dagher, and C. Xu, "An Automated Technique for Statistical Characterization of Brain Tissues in Magnetic Resonance Imaging", International Journal of Pattern Recognition and Artificial Intelligence, 11(8):1189-1211, December 1997.
• J.M. Links, J.L. Prince, and S.N. Gupta, "A Vector Wiener Filter for Dual-Radionuclide Imaging", IEEE Trans. on Medical Imaging, 15(5):700-709, October 1996. (doi)
• J.L. Prince, "Convolution Backprojection Formulas for 3-D Vector Tomography with Application to MRI", IEEE Trans. on Image Processing, 5(10):1462-1472, October 1996. (doi)
• C.A. Davatzikos, J.L. Prince, and R.N. Bryan, "Image Registration Based on Boundary Mapping", IEEE Trans. on Medical Imaging, 15(1):112-115, February 1996. (doi)
• S.N. Gupta, and J.L. Prince, "Stochastic Models for DIV-CURL Optical Flow Methods", IEEE Signal Processing Letters, 3(2):32-34, February 1996. (doi)
• C.A. Davatzikos, M. Vaillant, S. Resnick, J.L. Prince, S. Letovsky, and R.N. Bryan, "A Computerized Approach for Morphological Analysis of the Corpus Callosum", Journal of Computer Assisted Tomography, 20(1):88-97, January 1996. (doi)
• T.S. Denney Jr. and J.L. Prince, "Reconstruction of 3D left ventricular motion from planar tagged cardiac MR Images: An estimation theoretic approach", IEEE Trans. on Medical Imaging, 4(4):625-635, December 1995. (doi)
• J.L. Prince, Q. Tan, and D. Pham, "Optimization of MR pulse sequences for Bayesian image segmentation", Medical Physics, 22(10):1651-1656, October 1995. (PubMed)
• T.S. Denney, Jr., and J.L. Prince, "A frequency domain performance analysis of Horn and Schunck's optical flow algorithm for deformable motion", IEEE Trans. on Image Processing, 4(9):1324-1328, September 1995. (doi)
• C.A. Davatzikos and J.L. Prince, "An Active Contour Model for Mapping the Cortex", IEEE Trans. on Medical Imaging, 14(1):65-80, March 1995. (doi)
• J.L. Prince, "Tomographic Reconstruction of 3-D Vector Fields Using Inner Product Probes", IEEE Trans. on Image Processing, 3(2):216-219, March 1994. (doi)
• T.S. Denney, Jr. and J.L. Prince, "Optimal brightness functions for optical flow estimation of deformable motion", IEEE Trans. on Image Processing, 3(2):178-191, March 1994. (doi)
• M.A. Guttman, J.L. Prince, and E.R. McVeigh, "Tag and contour detection in tagged MR images of the left ventricle", IEEE Trans. on Medical Imaging, 13(1):74-88, March 1994. (doi)
• J.L. Prince and A.S. Willsky, "Hierarchical reconstruction using geometry and sinogram restoration", IEEE Trans. on Image Processing, 2(3):401-416, July 1993. (doi)
• H.W. Muller-Gartner, J.M. Links, J.L. Prince, R.N. Bryan, E.R. McVeigh, J.P.Leal, C. Davatzikos, J.J. Frost, "Measurement of Tracer Concentration in Brain Gray Matter Using Positron Emission Tomography: MRI-Based Correction for Partial Volume Effects", J. Cerebral Blood Flow and Metabolism, 12(4):571-583, 1992. (doi)
• J.L. Prince and E.R. McVeigh, "Motion estimation from tagged MR image sequences", IEEE Trans. on Medical Imaging, 11(2):238-249, June 1992. (doi)
• J.L. Prince and A.S. Willsky, "Convex Set Reconstruction Using Prior Shape Information", CVGIP: Graphical Models and Image Processing, 53(5):413-427, September 1991. (doi)
• J.L. Prince and A.S. Willsky, "Constrained Sinogram Restoration for Limited-Angle Tomography", Optical Engineering, 29:534-544, May 1990. (doi)
• J.L. Prince and A.S. Willsky, "Reconstructing convex shapes from support line measurements", IEEE Trans. on Pattern Analysis Machine Intelligence, 12(4):377-389, April 1990. (doi)
• J.L. Prince and A.S. Willsky, "A Geometric Projection-Space Reconstruction Algorithm", Linear Algebra and its Applications, 130:151-191, March 1990. (doi)

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