Publications

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Publications

2017

• N. Gonzalez Caldito, B. Antony, Y. He, A. Lang, J. Nguyen, A. Rothman, E. Ogbuokiri, A. Avornu, L. Balcer, E. Frohman, T.C. Frohman, P. Bhargava, J. Prince, P.A Calabresi, and S. Saidha, "Analysis of Agreement of Retinal-Layer Thickness Measures Derived from the Segmentation of Horizontal and Vertical Spectralis OCT Macular Scans", Current eye research, 43(3):415-423, 2017. (doi)
• D.L. Grimm, M. Stone, J. Woo, J. Lee, J.H. Hwang, G.E. Bedrosian, and J.L. Prince, "The Effects of Palate Features and Glossectomy Surgery on /s/ Production", Journal of Speech, Language, and Hearing Research, 60(12):3417-3425, 2017. (doi) (PubMed)
• A.D. Gomez, A. Knutsen, D.L. Pham, P.V. Bayly, and J.L. Prince, "Group Patterns of Acceleration-Induced Brain Deformation in Vivo", Computational Biomechanics for Medicine Workshop XII at the 20^th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017.
• I. Oguz, A. Carass, D.L. Pham, S. Roy, N. Subbana, P.A. Calabresi, P.A. Yushkevich, R.T. Shinohara, and J.L. Prince, "Dice overlap measures for multiple objects: Application to lesion segmentation", Brain Lesion Workshop, in conjunction with the 20^th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017. (doi) (PubMed)
• A. Carass, M. Shao, X. Li, B. Tran, B.E. Dewey, A.M. Blitz, S. Roy, J.L. Prince, and L.M. Ellingsen, "Whole Brain Parcellation with Pathology: Validation on Ventriculomegaly Patients", 3^rd International Workshop on Patch-based Techniques in Medical Imaging in conjunction with the 20^th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017. (doi) (PubMed)
• J. Glaister, A. Carass, D.L. Pham, J.A. Butman, and J.L. Prince, "Falx Cerebri Segmentation via Multiatlas Boundary Fusion", 20^th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017. (doi) (PubMed)
• Y. He, A. Carass, Y. Yun, C. Zhao, B.M. Jedynak, S.D. Solomon, S. Saidha, P.A. Calabresi, and J.L. Prince, "Towards topological correct segmentation of macular OCT from cascaded FCNs", 4^th Ophthalmic Medical Image Analysis Workshop in conjunction with the 20^th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017. (doi)
• C. Zhao, A. Carass, J. Lee, Y. He, and J.L. Prince, "Whole brain segmentation and labeling from CT using synthetic MR images", Eighth International Workshop on Machine Learning in Medical Imaging (MLMI 2017), Quebec, Canada, September 10, 2017. (doi)
• C. Zhao, A. Carass, A. Jog, J. Lee, and J.L. Prince, "A super-voxel based random forest synthesis framework for bidirectional MR/CT synthesis", Simulation and Synthesis in Medical Imaging (SASHIMI 2017) in conjunction with the 20^th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2017), Quebec, Canada, September 10 - 14, 2017. (doi)
• F. Xing, J. Woo, A.D. Gomez, D.L. Pham, P.V. Bayly, M. Stone, and J.L. Prince, "Phase Vector Incompressible Registration Algorithm for Motion Estimation From Tagged Magnetic Resonance Images", IEEE Trans. on Medical Imaging, 36(10):2116-2128, 2017. (doi) (PubMed)
• B.J. Antony, B.-J. Kim, A. Lang, A. Carass, J.L. Prince, and D.J. Zack, "Automated segmentation of mouse OCT volumes (ASiMOV): Validation & clinical study of a light damage model", PLoS ONE, 12(8):e0181059, 2017. (doi) (PubMed)
• A.D. Gomez, A. Knutsen, D.L. Pham, P.V. Bayly, and J.L. Prince, "Full-Field 4D Measurements of Acceleration-Induced Deformation in the Living Human Brain", 14^th US National Congress on Computational Mechanics (USNCCM), Montreal, Canada, July 2017.
• J. Glaister, A. Carass, T. NessAiver, J.V. Stough, S. Saidha, P.A. Calabresi, and J.L. Prince, "Thalamus segmentation using multi-modal feature classification: Validation and pilot study of an age-matched cohort", NeuroImage, 158:430-440, 2017. (doi) (PubMed)
• J. Lee, O.Y. Mian, Y. Le, H.J. Bae, E.C. Burdette, T.L. DeWeese, J.L. Prince, and D.Y. Song, "Intraoperative Registered Ultrasound and Fluoroscopy (iRUF) for dose calculation during prostate brachytherapy: Improved accuracy compared to standard ultrasound-based dosimetry", Radiother Oncol, 124(1):61-67, 2017. (doi) (PubMed)
• A. Carass, S. Roy, A. Jog, J.L. Cuzzocreo, E. Magrath, A. Gherman, J. Button, J. Nguyen, P.-L. Bazin, P.A. Calabresi, C.M. Crainiceanu, L.M. Ellingsen, D.S. Reich, J.L. Prince, and D.L. Pham, "Longitudinal multiple sclerosis lesion segmentation data resource", Data in Brief, 12:346-350, 2017. (doi) (PubMed)
• S. Ganpule, N.P. Daphalapurkar, K.T. Ramesh, A.K. Knutsen, D.L. Pham, P.V. Bayly, and J.L. Prince, "A Three-Dimensional Computational Human Head Model That Captures Live Human Brain Dynamics", J. Neurotrauma, 34(13):2154-2166, 2017. (doi) (PubMed)
• L. Pereira, R.D. Airan, A. Fishman, J.J. Pillai, K. Kansal, C.U. Onyike, J.L. Prince, S.H. Ying, and H.I. Sair, "Resting-state functional connectivity and cognitive dysfunction correlations in spinocerebelellar ataxia type 6 (SCA6)", Human Brain Mapping, 38(6):3001-3010, 2017. (doi) (PubMed)
• F. Xing, J.L. Prince, M.L. Stone, V.J. Wedeen, G. El Fakhri, and J. Woo, "A four-dimensional motion field atlas of the tongue from tagged and cine magnetic resonance imaging", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• B.E. Dewey, A. Carass, A.M. Blitz, and J.L. Prince, "Efficient Multi-Atlas Registration using an Intermediate Template Image", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• J.A. Ramsey, A.D. Gomez, and J.L. Prince, "Test-suite for image-based motion estimation of the brain and tongue", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• B.J. Antony, A. Carass, A. Lang, B.-J. Kim, D.J. Zack, and J.L. Prince, "Longitudinal Analysis of Mouse SDOCT Volumes", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• J. Glaister, A. Carass, D. L. Pham, and J.L. Prince, "Automatic falx cerebri and tentorium cerebelli segmentation from Magnetic Resonance Images", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• A. Lang, A. Carass, A.K. Bittner, H.S. Ying, and J.L. Prince, "Improving graph-based OCT segmentation for severe pathology in Retinitis Pigmentosa patients", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• J. Lee, A. Carass, A. Jog, C. Zhao, and J. L. Prince, "Multi-atlas-based CT synthesis from conventional MRI with patch-based refinement for MRI-based radiotherapy planning", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• Y. Yun, A. Carass, A. Lang, J.L. Prince, and B.J. Antony, "Collaborative SDOCT Segmentation and Analysis Software", Proceedings of SPIE Medical Imaging (SPIE-MI 2017), Orlando, FL, February 11 - 16, 2017. (doi) (PubMed)
• A. Carass, S. Roy, A. Jog, J.L. Cuzzocreo, E. Magrath, A. Gherman, J. Button, J. Nguyen, F. Prados, C.H. Sudre, M.J. Cardoso, N. Cawley, O. Ciccarelli, C.A.M. Wheeler-Kingshott, S. Ourselin, L. Catanese, H. Deshpande, P. Maurel, O. Commowick, C. Barillot, X. Tomas-Fernandez, S.K. Warfield, S. Vaidya, A. Chunduru, R. Muthuganapathy, G. Krishnamurthi, A. Jesson, T. Arbel, O. Maier, H. Handels, L.O. Iheme, D. Unay, S. Jain, D.M. Sima, D. Smeets, M. Ghafoorian, B. Platel, A. Birenbaum, H. Greenspan, P.-L. Bazin, P.A. Calabresi, C.M. Crainiceanu, L.M. Ellingsen, D.S. Reich, J.L. Prince, and D.L. Pham, "Longitudinal Multiple Sclerosis Lesion Segmentation: Resource and Challenge", NeuroImage, 148(C):77-102, 2017. (doi) (PubMed)
• K. Kansal, Z. Yang, A.M. Fishman, H.I. Sair, S.H. Ying, B.M. Jedynak, J.L. Prince, C.U. Onyike, "Structural cerebellar correlates of cognitive and motor dysfunctions in cerebellar degeneration", Brain, 140(3):707-720, 2017. (doi) (PubMed)
• M. Chen, A. Carass, A. Jog, J. Lee, S. Roy, and J.L. Prince, "Cross contrast multi-channel image registration using image synthesis for MR brain images", Medical Image Analysis, 36(2):2-14, 2017. (doi) (PubMed)
• C Ye and J.L. Prince, "Probabilistic tractography using Lasso bootstrap", Medical Image Analysis, 35:544-553, 2017. (doi) (PubMed)
• A. Jog, A. Carass, S. Roy, D.L. Pham, and J.L. Prince, "Random Forest Regression for Magnetic Resonance Image Synthesis", Medical Image Analysis, 35:475-488, 2017. (doi) (PubMed)