Publications/2022

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2022

  • Y. Liu, A. Carass, L. Zuo, Y. He, S. Han, L. Gregori, S. Murray, R. Mishra, J. Lei, P.A. Calabresi, S. Saidha, and J.L. Prince, "Disentangled Representation Learning for OCTA Vessel Segmentation with Limited Training Data", IEEE Trans. Med. Imag., 41(12):3686-3698, 2022. DOI: "Disentangled Representation Learning for OCTA Vessel Segmentation with Limited Training Data" (PubMed)
  • K. Upadhyay, A. Alshareef, A.K. Knutsen, C.L. Johnson, A. Carass, P.V. Bayly, D.L. Pham, J.L. Prince, and K.T. Ramesh, "Development and validation of subject-specific 3D human head models based on a nonlinear visco-hyperelastic constitutive framework", J. R. Soc. Interface, 19:20220561, 2022. DOI: "Development and validation of subject-specific 3D human head models based on a nonlinear visco-hyperelastic constitutive framework"
  • K. Upadhyay, A. Alshareef, A.K. Knutsen, C.L. Johnson, A. Carass, P.V. Bayly, D.L. Pham, J.L. Prince, and K.T. Ramesh, "Development of Subject-Specific 3D Human Head Models Based on a Nonlinear Visco-Hyperelastic Constitutive Framework", Society of Engineering Science Annual Technical Meeting (SES 2022), College Station, TX, October 16 – 19, 2022.
  • Y. Xue, B.E. Dewey, L. Zuo, S. Han, A. Carass, P. Duan, S. Remedios, D.L. Pham, S. Saidha, P.A. Calabresi, and J.L. Prince, "Bi-directional Synthesis of Pre- and Post-contrast MRI via Guided Feature Disentanglement", Simulation and Synthesis in Medical Imaging (SASHIMI 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. DOI: "Bi-directional Synthesis of Pre- and Post-contrast MRI via Guided Feature Disentanglement" Bi-directional Synthesis of Pre- and Post-contrast MRI via Guided Feature Disentanglement
  • Y. Liu, L. Zuo, S. Han, J. L. Prince, and A. Carass, "Coordinate Translator for Learning Deformable Medical Image Registration", 3rd Multiscale Multimodal Medical Imaging (MMMI 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. arXiv: "Coordinate Translator for Learning Deformable Medical Image Registration" Coordinate Translator for Learning Deformable Medical Image Registration
  • L. Zuo, Y. Liu, Y. Xue, S. Han, M. Bilgel, S.M. Resnick, J.L. Prince, and A. Carass, "Disentangling from A Single MR Modality", 2nd Workshop on Data Augmentation, Labeling, and Imperfections (DALI 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. DOI: "Disentangling from A Single MR Modality" arXiv: "Disentangling from A Single MR Modality" Disentangling from A Single MR Modality
  • G. Morilhat, N. Kifle, S. FinesilverSmith, B. Ruijsink, H. Tegegne Desita, Z. Tegegne Desita, E. Puyol-Antón, A. Carass, and A.P. King, "Deep Learning-based Segmentation of Pleural Effusion From Ultrasound Using Coordinate Convolutions", 2nd workshop on aFfordable AI and healthcare for Resource diverse global health (FAIR 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. arXiv: "Deep Learning-based Segmentation of Pleural Effusion From Ultrasound Using Coordinate Convolutions" Deep Learning-based Segmentation of Pleural Effusion From Ultrasound Using Coordinate Convolutions
  • S.W. Remedios, S. Han, Y. Xue, T. Tran, A. Carass, D.L. Pham, and J.L. Prince, "Deep filter bank regression for super-resolution of anisotropic MR brain images", 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. DOI: "Deep filter bank regression for super-resolution of anisotropic MR brain images" arXiv: "Deep filter bank regression for super-resolution of anisotropic MR brain images" Deep filter bank regression for super-resolution of anisotropic MR brain images
  • X. Liu, F. Xing, J.L. Prince, J. Zhuo, M. Stone, G.E. Fakhri, and J. Woo, "Tagged-MRI2Audio with Attention Guided Heterogeneous Translator", 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. DOI: "Tagged-MRI2Audio with Attention Guided Heterogeneous Translator" arXiv: "Tagged-MRI2Audio with Attention Guided Heterogeneous Translator"
  • E.S. Sotirchos, E.S. Vasileiou, A.G. Filippatou, K.C. Fitzgerald, M.D. Smith, H.-N. Lord, G. Kalaitzidis, J. Lambe, A. Duval, J.L. Prince, E.M. Mowry, S. Saidha, and P.A. Calabresi, "Association of Serum Neurofilament Light Chain With Inner Retinal Layer Thinning in Multiple Sclerosis", Neurology, 99(7):e688-e697, 2022. DOI: "Association of Serum Neurofilament Light Chain With Inner Retinal Layer Thinning in Multiple Sclerosis"
  • N.E. Fritz, E.M. Edwards, C. Ye, J. Prince, Z. Yang, T. Gressett, J. Keller, E. Myers, P.A. Calabresi, and K.M. Zackowski, "Cerebellar contributions to motor and cognitive control in Multiple Sclerosis", Archives of Physical Medicine and Rehabilitation, 103(8):1592-1599, 2022. DOI: "Cerebellar contributions to motor and cognitive control in Multiple Sclerosis"
  • K. Upadhyay, D.G. Giovanis, A. Alshareef, A.K. Knutsen, C.L. Johnson, A. Carass, P.V. Bayly, M.D. Shields, and K.T. Ramesh, "Data-driven Uncertainty Quantification in Computational Human Head Models", Computer Methods in Applied Mechanics and Engineering, 398:115108, 2022. DOI: "Data-driven Uncertainty Quantification in Computational Human Head Models"
  • K. Upadhyay, R. Jagani, D.G. Giovanis, A. Alshareef, A.K. Knutsen, C.L. Johnson, A. Carass, P.V. Bayly, M.D. Shields, and K.T. Ramesh, "Effect of Human Head Shape on the Risk of Traumatic Brain Injury: A Gaussian Process Regression-Based Machine Learning Approach", World Congress of Biomechanics, Taipei, Taiwan, July 10 – 13, 2022.
  • A. Alshareef, P.V. Bayly, A.K. Knutsen, K. Upadhyay, R.J. Okamoto, A. Carass, J.A. Butman, D.L. Pham, J.L. Prince, K.T. Ramesh, and C.L. Johnson, "A Publicly Available Dataset of Human Brain Biomechanics Using MR Imaging for Computational Model Validation", 39th Annual National Neurotrauma Symposium (NNS 2022), Atlanta, GA, June 26 – 29, 2022.
  • X. Liu, F. Xing, M. Stone, J.L. Prince, J. Kim, G. El Fakhri, J. Woo, "Cmri2spec: Cine MRI Sequence to Spectrogram Synthesis via A Pairwise Heterogeneous Translator", IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP 2022), Singapore, May 22–27, 2022.
  • X. Liu, F. Xing, M. Stone, J.L. Prince, J. Kim, G. El Fakhri, and J. Woo, "Tagged-MRI to audio synthesis with a pairwise heterogeneous deep translator", The Journal of the Acoustical Society of America, 151:A133, 2022. DOI: "Tagged-MRI to audio synthesis with a pairwise heterogeneous deep translator"
  • A.G. Filippatou, E.S. Vasileiou, Y. He, K.C. Fitzgerald, G. Kalaitzidis, J. Lambe, M.A. Mealy, M. Levy, Y. Liu, J.L. Prince, E.M. Mowry, S. Saidha, P.A. Calabresi, E.S. Sotirchos, C. Fraser, and S. Mollan, "Optic Neuritis–Independent Retinal Atrophy in Neuromyelitis Optica Spectrum Disorder", Journal of Neuro-Ophthalmology, 42(1):e40-e47, 2022. DOI: "Optic Neuritis–Independent Retinal Atrophy in Neuromyelitis Optica Spectrum Disorder"
  • P. Tohidi, S.W. Remedios, D.L. Greenman, M. Shao, S. Han, B.E. Dewey, J.C. Reinhold, Y.-Y. Chou, D.L. Pham, J.L. Prince, and A. Carass, "Multiple Sclerosis Brain Lesion Segmentation with Different Architecture Ensembles", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Multiple Sclerosis Brain Lesion Segmentation with Different Architecture Ensembles"
  • C. Gao, L. Jin, J.L. Prince, and A. Carass, "Effects of Defacing Whole Head MRI on Neuroanalysis", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Effects of Defacing Whole Head MRI on Neuroanalysis"
  • A. Alshareef, A. Carass, A.K. Knutsen, M.E. Peters, K.T. Ramesh, and J.L. Prince, "Investigating the Effect of Ventricle Size on Brain Deformation using Computational Models", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Investigating the Effect of Ventricle Size on Brain Deformation using Computational Models"
  • A. Alshareef, C.L. Johnson, A. Carass, A.K. Knutsen, K.T. Ramesh, P.V. Bayly, D.L. Pham, and J.L. Prince, "Relationship between cerebral vasculature and brain stiffness measured using MR elastography", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Relationship between cerebral vasculature and brain stiffness measured using MR elastography"
  • P. Duan, S. Han, L. Zuo, Y. An, Y. Liu, A. Alshareef, J. Lee, A. Carass, S.M. Resnick, and J.L. Prince, "Cranial Meninges Reconstruction Based on Convolutional Networks and Deformable Models: Applications to Longitudinal Study of Normal Aging", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Cranial Meninges Reconstruction Based on Convolutional Networks and Deformable Models: Applications to Longitudinal Study of Normal Aging"
  • M. Shao, L. Zuo, A. Carass, J. Zhuo, R. P. Gullapalli, and J.L. Prince, "Evaluating the impact of MR image harmonization on thalamus deep network segmentation", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Evaluating the impact of MR image harmonization on thalamus deep network segmentation" (PubMed)
  • S.P. Hays, L. Zuo, A. Carass, and J.L. Prince, "Evaluating the impact of MR image contrast on whole brain segmentation", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Evaluating the impact of MR image contrast on whole brain segmentation"
  • F. Xing, X. Liu, T.G. Reese, M. Stone, V.J. Wedeen, J.L. Prince, G. El Fakhri, and J. Woo, "Measuring strain in diffusion-weighted data using tagged magnetic resonance imaging", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Measuring strain in diffusion-weighted data using tagged magnetic resonance imaging"
  • X. Liu, F. Xing, J.L. Prince, M. Stone, G. El Fakhri, and J. Woo, "Structure-aware unsupervised tagged-to-cine MRI synthesis with self disentanglement", Proceedings of SPIE Medical Imaging (SPIE-MI 2022), San Diego, CA, February 20–24, 2022. DOI: "Structure-aware unsupervised tagged-to-cine MRI synthesis with self disentanglement"
  • R. Kerestes, S. Han, S. Balachander, C. Hernandez-Castillo, J.L. Prince, J. Diedrichsen, and I.H. Harding, "A Standardized Pipeline for Examining Human Cerebellar Grey Matter Morphometry using Structural Magnetic Resonance Imaging", JoVE, 180:e63340, 2022. DOI: "A Standardized Pipeline for Examining Human Cerebellar Grey Matter Morphometry using Structural Magnetic Resonance Imaging"
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