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IACL Lab members at CMSC 2023 in Aurora, Colorado.
Dr. Muhan Shao being hooded by Prof. Jerry L. Prince.
IACL lab members (past and present) at SPIE-MI 2023.
Allen Hong giving a presentation capping off his REU Summer in IACL working with Dr. Ahmed Alshareef.
Lab members Lianrui Zuo and Yihao Liu with Dr. Yufan He after his graduation in May 2022.
Newly minted PhDs Drs. Blake Dewey and Yufan He flank Prof. J.L. Prince.
IACL lab members at SPIE-MI 2022.
Chenyu Gao presenting his poster about MR defacing at SPIE-MI 2022.
Yihao Liu presenting a poster at SPIE-MI 2020.
Shuo Han presenting a poster at SPIE-MI 2020.
Yufan He wins a MICCAI Young Scientist Award at MICCAI 2019.
Prof. Jerry L. Prince congratulating Jeffrey Glaister on his successful defense in October 2019.
Yihao Liu presenting a poster at ISBI 2019.
Recent News Items
2023
August
- Lianrui Zuo's new harmonization paper titled "HACA3: A unified approach for multi-site MR image harmonization" appears in Computerized Medical Imaging and Graphics. (doi)
- A portion of Lianrui Zuo's interview with NeurologyLive is now available, it was recorded at the 2023 Consortium of Multiple Sclerosis Centers (CMSC) Annual Meeting, Aurora, CO, May 31 - June 3, 2023.
July
- As part of our collaboration with Washington Univeristy in St. Louis, Dr. Ruth Okamoto's paper titled "Effect Of Direction And Frequency Of Skull Motion On Mechanical Vulnerability Of The Human Brain" appears in the Journal of Biomechanical Engineering. (doi)
- IACL papers at Medical Imaging with Deep Learning (MIDL 2023), Nashville, TN, July 10–12, 2023.
- Zhangxing Bian presented "DRIMET: Deep Registration-based 3D Incompressible Motion Estimation in Tagged-MRI with Application to the Tongue".
- Savannah Hays presented "Exploring the Optimal Operating MR Contrast for Brain Ventricle Parcellation".
- Zhangxing Bian presented "DRIMET: Deep Registration-based 3D Incompressible Motion Estimation in Tagged-MRI with Application to the Tongue".
| IACL at MIDL 2023 | ||||
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| Zhangxing Bian presenting "DRIMET: Deep Registration-based 3D Incompressible Motion Estimation in Tagged-MRI with Application to the Tongue". | Savannah Hays with previous lab member Chenyu Gao. | |||
- Lianrui Zuo is interviewed by the Video Journal of Neurology. Discussing the following topics:
June
Savannah Hays, Lianrui Zuo, and Samuel Remedios at the 2023 Consortium of Multiple Sclerosis Centers (CMSC) Annual Meeting, Aurora, CO, May 31 - June 3, 2023..
- IACL papers at the 2023 Consortium of Multiple Sclerosis Centers (CMSC) Annual Meeting, Aurora, CO, May 31 - June 3, 2023.
- Dr. Blake Dewey presented "Compliance with CMSC MRI Guidelines in a Multi-Center, Pragmatic, Randomized Clinical Trial: Improvements over Time" and "Measuring MRIs Differences Between Sites: Design of a Traveling Subject Study in MS".
- Lianrui Zuo presented Dr. Shuwen Wei's work titled "Retinal layer thickness comparison between the UK BioBank and people with multiple sclerosis" and "Synthesizing Missing MRI Sequences to Improve Processing Images in Multiple Sclerosis", and his own work "Inconsistent MR acquisition in longitudinal volumetric analysis: Impacts and solutions".
- Samuel Remedios presented "Cautions in Anisotropy: Thick Slices and Slice Gaps in 2D MR Acquisition Tarnish Volumetrics".
- Savannah Hays presented "Quantifying contrast differences among MR images used in clinical studies".
| IACL at CMSC 2023 | ||
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| Dr. Blake Dewey between his two posters "Compliance with CMSC MRI Guidelines in a Multi-Center, Pragmatic, Randomized Clinical Trial: Improvements over Time" and "Measuring MRIs Differences Between Sites: Design of a Traveling Subject Study in MS". | Samuel Remedios presenting "Cautions in Anisotropy: Thick Slices and Slice Gaps in 2D MR Acquisition Tarnish Volumetrics". | |
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| Savannah Hays presenting "Quantifying contrast differences among MR images used in clinical studies". | Lianrui Zuo presenting "Inconsistent MR acquisition in longitudinal volumetric analysis: impacts and solutions". | |
May
Dr. Muhan Shao being hooded by Prof. J.L. Prince.
- Congratulations to Muhan Shao on receiving her PhD.
- Congratulations to Anqi "Amy" Feng on receiving her masters, she will be staying at Hopkins and joining the PhD program.
April
- Savannah Hays receives an NSF Fellowship.
Savannah Hays presenting "Rapid brain meninges surface reconstruction with layer topology guarantee" at ISBI 2023 in Cartagena de Indias, Colombia.
- IACL papers at the 20th IEEE International Symposium on Biomedical Imaging (ISBI 2023), Cartagena de Indias, Colombia, April 18-21, 2023.
- Savannah Hays' paper titled "Optimal operating MR contrast for brain ventricle parcellation".
- Yuli Wang's paper titled "Automated ventricle parcellation and Evan’s ratio computation in pre- and post-surgical ventriculomegaly".
- Peiyu Duan's paper titled "Rapid brain meninges surface reconstruction with layer topology guarantee".
- Anqi Feng's paper titled "Label propagation via random walk for training robust thalamus nuclei parcellation model from noisy annotations".
| IACL at ISBI 2023 | ||
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| IACL Posters at ISBI 2023 in Cartagena de Indias, Colombia. | ||
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| Savannah Hays pulling triple poster duty at ISBI 2023. | ||
- Dr. Yufan He's paper titled "Longitudinal deep network for consistent OCT layer segmentation" appears in Biomedical Optics Express. (doi)
February
- Congratulations to Zhangxing Bian on winning a Best Paper Award at the Proceedings of SPIE Medical Imaging (SPIE-MI 2023), San Diego, CA, February 19–23, 2023.
- IACL papers at the Proceedings of SPIE Medical Imaging (SPIE-MI 2023), San Diego, CA, February 19–23, 2023.
- Jinglun Yu presented "New starting point registration method for tagged MRI tongue motion estimation".
- Lianrui Zuo presented Pouria Tohidi's work titled "Joint synthesis of WMn MPRAGE and parameter maps using deep learning and an imaging equation".
- Yuli Wang presented "Investigation of probability maps in deep-learning-based brain ventricle parcellation".
- Chang Yan's work titled "Segmenting thalamic nuclei from manifold projections of multi-contrast MRI".
- Samuel Remedios presented "A deep generative prior for high-resolution isotropic MR head slices".
- Zhangxing Bian presented "FastCod: Fast Brain Connectivity in Diffusion Imaging".
- Zhangxing Bian presented "DrDisco: Deep Registration for Distortion Correction of Diffusion MRI with single phase-encoding".
- Lianrui Zuo presented "A latent space for unsupervised MR image quality control via artifact assessment".
- Other accepted papers at SPIE-MI 2023 coming from collaborations with IACL.
- Allen Hong from The College of New Jersey, presented "Investigating the effect of cerebral atrophy on brain deformation using subject-specific models".
- Xiaofeng Liu from Massachusetts General Hospital, presented "Synthesizing audio from tongue motion during speech using tagged MRI via transformer".
| IACL at SPIE-MI 2023 | ||||
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| Lianrui Zuo presenting Pouria Tohidi's work titled "Joint synthesis of WMn MPRAGE and parameter maps using deep learning and an imaging equation". | Zhangxing Bian presenting "DrDisco: Deep Registration for Distortion Correction of Diffusion MRI with single phase-encoding". | |||
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| Samuel Remedios presenting "A deep generative prior for high-resolution isotropic MR head slices". | Lianrui Zuo presenting "A latent space for unsupervised MR image quality control via artifact assessment". | |||
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| Allen Hong presenting "Investigating the effect of cerebral atrophy on brain deformation using subject-specific models". | Jinglun Yu presenting "New starting point registration method for tagged MRI tongue motion estimation". | |||
- Dr. Muhan Shao's paper titled "Analysis of Tongue Muscle Strain During Speech From Multimodal Magnetic Resonance Imaging" appears in Journal of Speech, Language, and Hearing Research. (doi) (PubMed)
January
- Shuo Han's paper titled "ESPRESO: An algorithm to estimate the slice profile of a single magnetic resonance image" appears in Magnetic Resonance Imaging. (doi) (PubMed)
2022
December
- Yihao Liu's paper titled "Disentangled Representation Learning for OCTA Vessel Segmentation with Limited Training Data" appears in IEEE Trans. on Medical Imaging. (doi) (PubMed)
November
- The lab visited the Corradetti Glass Studio to do some glass blowing.
| IACL at Corradetti Glass | |||||
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September
- IACL papers at the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022.
- Samuel W. Remedios presented "Deep filter bank regression for super-resolution of anisotropic MR brain images", 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. (doi)
- Xiaofeng Liu presented "Tagged-MRI2Audio with Attention Guided Heterogeneous Translator", 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022.
- Lianrui Zuo's presented "Disentangling from A Single MR Modality", 2nd Workshop on Data Augmentation, Labeling, and Imperfections (DALI 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022.
- Yihao Liu presented "Coordinate Translator for Learning Deformable Medical Image Registration", 3rd Multiscale Multimodal Medical Imaging (MMMI 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022.
- Germain Morilhat presented "Deep Learning-based Segmentation of Pleural Effusion From Ultrasound Using Coordinate Convolutions", 2nd workshop on aFfordable AI and healthcare for Resource diverse global health (FAIR 2022) in conjunction with the 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022.
- Samuel W. Remedios presented "Deep filter bank regression for super-resolution of anisotropic MR brain images", 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2022), Singapore, September 18–22, 2022. (doi)
