Difference between revisions of "Research"

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{{TOCright}}
 
{{TOCright}}
 
{{h3|Active Projects}}
 
{{h3|Active Projects}}
{{h4|BRAIN MAPPING}}
+
{{h4|Brain Mapping}}
 +
* [[Protocol for Cerebellar Labeling]]
 +
* [[Automatic method for thalamus parcellation using multi-modal feature classification]]
 +
 
 +
 
 +
<!--
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{{h4|Biological Motion Estimation}}
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* Tongue
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* Brain Biomechanics
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-->
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 +
 
 +
<!--
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{{h4|Image Processing and Analysis}}
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* Synethesis
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* Quality Control
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-->
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 +
 
 +
{{h4|Optical Coherence Tomography}}
 +
* [[Automatic segmentation of microcystic macular edema in OCT]]
 +
<!--
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* Deep learning based OCT
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* Fast Levelsets
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-->
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 +
 
 +
 
 +
{{h3|Previous Projects}}
 +
{{h4|Brain Mapping}}
 
* [[CRUISE|CRUISE: Cortical Reconstruction Using Implicit Surface Evolution]]
 
* [[CRUISE|CRUISE: Cortical Reconstruction Using Implicit Surface Evolution]]
 
* [[Longitudinal changes in cortical thickness associated with normal aging]]
 
* [[Longitudinal changes in cortical thickness associated with normal aging]]
* [[Protocol for Cerebellar Labeling]]
 
* [[System for integrated neuroimaging analysis and processing of structure]]
 
 
* [[Principal Component Analysis of Cerebellar Shape]]
 
* [[Principal Component Analysis of Cerebellar Shape]]
 
* [[Automatic magnetic resonance spinal cord segmentation]]
 
* [[Automatic magnetic resonance spinal cord segmentation]]
 
* [[Deformation field correction for spatial normalization of PET images using a population-derived partial least squares model]]
 
* [[Deformation field correction for spatial normalization of PET images using a population-derived partial least squares model]]
 
* [[PET Attenuation Correction using Synthetic CT from Ultrashort Echo-time MRI]]
 
* [[PET Attenuation Correction using Synthetic CT from Ultrashort Echo-time MRI]]
* [[Automatic method for thalamus parcellation using multi-modal feature classification]]
+
* [[System for integrated neuroimaging analysis and processing of structure]]
 
* [[Deep Learning for Cerebellar Ataxia Classification and Functional Score Regression]]
 
* [[Deep Learning for Cerebellar Ataxia Classification and Functional Score Regression]]
 
* [[Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis]]
 
* [[Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis]]
 +
* {{static|pdf/|Statistical Characterization of Brain Tissue in MRI}}
 +
* {{static|ice/|Interactive Cortical Editor}}
 +
* {{static|ipmi/|Finding the Brain Cortex Using Fuzzy Segmentation, Isosurfaces, and Deformable Surface Models}}
 +
* {{static|gtca/|Multi-scale Graph-based Topology Correction Algorithm}}
 +
* {{static|tgdm/|Topology Preserving Geometric Deformable Models}}
 +
* {{static|asm/|Active Shape Models for Sulcal Labeling}}
 +
* {{static|fantasm/|Robust Tissue Classification using FANTASM}}
 +
* {{static|ati/|Automatically Identifying White Matter Tracts Using Cortical Labels}}
  
  
{{h4|BIOLOGICAL MOTION ESTIMATION}}
+
{{h4|Biological Motion Estimation}}
 
* {{static|mrmarkers/|Cardiac Material Markers from Tagged MRI}}
 
* {{static|mrmarkers/|Cardiac Material Markers from Tagged MRI}}
 
* {{static|harp/|Harmonic Phase (HARP) Magnetic Resonance Imaging}}
 
* {{static|harp/|Harmonic Phase (HARP) Magnetic Resonance Imaging}}
 +
:* [[Resources#HARP|Download available from our Resources Page]]
 
* {{static|fastharp/|Real-Time Imaging of Cardiac Strain Using a FastHARP Pulse Sequence}}
 
* {{static|fastharp/|Real-Time Imaging of Cardiac Strain Using a FastHARP Pulse Sequence}}
 
* [[Three-dimensional regional strain analysis in myocardial infarction]]
 
* [[Three-dimensional regional strain analysis in myocardial infarction]]
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{{h4|IMAGE PROCESSING AND ANALYSIS}}
+
{{h4|Image Processing and Analysis}}
 
* {{static|gvf/|GVF Active Contours}}
 
* {{static|gvf/|GVF Active Contours}}
 
* {{static|filtint/|Recursive Spatio-Temporal Function Estimation}}
 
* {{static|filtint/|Recursive Spatio-Temporal Function Estimation}}
 
* [[MGDM|Multiple-object Geometric Deformable Model]]
 
* [[MGDM|Multiple-object Geometric Deformable Model]]
 +
:* [http://www.nitrc.org/projects/mgdm/ (Software Page)]
 
* [[Reconstruction of high resolution tongue volumes from MRI]]
 
* [[Reconstruction of high resolution tongue volumes from MRI]]
 
* [[Magnetic Resonance Image Example Based Contrast Synthesis]]
 
* [[Magnetic Resonance Image Example Based Contrast Synthesis]]
 +
:* [http://www.nitrc.org/projects/image_synthesis/ (Software Page)]
 
* [[MR Image Synthesis by Contrast Learning On Neighborhood Ensembles]]
 
* [[MR Image Synthesis by Contrast Learning On Neighborhood Ensembles]]
 
* [[Subject Specific Sparse Dictionary Learning for Atlas Based Brain MRI Segmentation]]
 
* [[Subject Specific Sparse Dictionary Learning for Atlas Based Brain MRI Segmentation]]
* [[A Multivariate Nonlinear Mixed Effects Model for Longitudinal Image Analysis]]
+
:* {{iacl|~roy/softwares/S3DL_withlesion.zip|(Software Download)}}
  
  
{{h4|IMAGE-GUIDED INTERVENTIONS}}
+
{{h4|Image-Guided Interventions}}
 
* [[Prostate Brachytherapy Intraoperative Seed Reconstruction]]
 
* [[Prostate Brachytherapy Intraoperative Seed Reconstruction]]
 
* [[Seed Segmentation in Prostate Brachytherapy]]
 
* [[Seed Segmentation in Prostate Brachytherapy]]
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+
{{h4|Optical Coherence Tomography}}
{{h4|OPTICAL COHERENCE TOMOGRAPHY}}
+
 
* [[Retinal layer segmentation of macular OCT images]]
 
* [[Retinal layer segmentation of macular OCT images]]
 +
:* [http://www.nitrc.org/projects/aura_tools/ (Software Page)]
 
* [[MGDM segmentation of macular OCT images]]
 
* [[MGDM segmentation of macular OCT images]]
 
* [[Analysis of macular OCT images using deformable registration]]
 
* [[Analysis of macular OCT images using deformable registration]]
* [[Automatic segmentation of microcystic macular edema in OCT]]
 
 
 
 
{{h3|Previous Projects}}
 
{{h4|BRAIN MAPPING}}
 
* {{static|pdf/|Statistical Characterization of Brain Tissue in MRI}}
 
* {{static|ice/|Interactive Cortical Editor}}
 
* {{static|ipmi/|Finding the Brain Cortex Using Fuzzy Segmentation, Isosurfaces, and Deformable Surface Models}}
 
* {{static|gtca/|Multi-scale Graph-based Topology Correction Algorithm}}
 
* {{static|tgdm/|Topology Preserving Geometric Deformable Models}}
 
* {{static|asm/|Active Shape Models for Sulcal Labeling}}
 
* {{static|fantasm/|Robust Tissue Classification using FANTASM}}
 
* {{static|ati/|Automatically Identifying White Matter Tracts Using Cortical Labels}}
 

Latest revision as of 11:09, 18 February 2020

Research

Active Projects

Brain Mapping




Optical Coherence Tomography


Previous Projects

Brain Mapping


Biological Motion Estimation


Image Processing and Analysis


Image-Guided Interventions


Optical Coherence Tomography